Cholangiocarcinoma Terms & Meanings
Understand the words you hear.
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Have a pathology or genomic report?
Use the CCA Mutation Matchmaker to understand what was tested, what was found, what is not shown or unclear, what the biology means, and what those findings could change next.
See how the CCA Mutation Matchmaker works
The CCA Mutation Matchmaker reconstructs a pathology or genomic report into a hierarchy of understanding: what test was performed, what it could detect, what was found, what is not shown, what the biology means, and what treatment opportunity may follow from it.
A mutation-drug match does not automatically outrank a curative treatment opportunity. Where complete curative-intent surgery remains achievable, that opportunity must remain visible. Drug treatment may instead help move a patient toward surgery, treat microscopic disease after surgery, or control disease that cannot currently be removed.
Understand the test
Identify the report type, sample, testing method, what was actually tested and what the test was capable of detecting.
Identify the findings
Pull out important mutations, fusions, amplifications, biomarkers, IHC findings and other treatment-relevant results.
Explain what they mean
Translate the biology into Zero Cog and Cell City language so the finding can be understood, not merely named.
Identify the opportunity
Connect relevant findings to surgery, systemic treatment, targeted treatment, immunotherapy, local treatment, trials or further testing.
Know what to ask next
Turn the most important findings, gaps and opportunities into clear questions and next actions.
Your report is separated into four states
What does this finding change?
The Matchmaker does not stop at mutation → drug. It asks what opportunity the finding creates in the whole treatment pathway.
The result is not just another report.
The Matchmaker prioritises the findings, gaps and treatment opportunities most likely to affect the next decision, then turns them into questions to take to your medical team.
The current Matchmaker demonstration uses a fictional report. Do not submit a real medical report yet.
Treatment Goal
What is treatment trying to achieve?
Cholangiocarcinoma has a curative pathway: surgery.
Before accepting any treatment plan, understand its goal. Start with cure, then understand who should assess it, and what must happen next if cure is not possible today.
Start With Cure
Can surgery cure me?
The best possible treatment result in cholangiocarcinoma is cure. Curative-intent treatment begins with specialist surgical assessment. For most patients this means determining whether the cancer can be completely removed by surgery.
For a small and highly selected group of patients, liver transplantation may also provide a curative-intent pathway.
Ask: Has my case been assessed directly by a surgeon with high-volume cholangiocarcinoma experience who regularly performs complex CCA surgery?
If not, get that assessment before accepting that surgery is not possible.
If resection is not possible today, ask: Could liver transplantation apply to me?
If neither pathway is possible today, ask: What exactly is stopping it, and can treatment change that?
Curative intent
Treatment given with the aim of curing the cancer.
See what this means for you
Think of cure as the destination. The first question is whether there is a safe route to get there.
In cholangiocarcinoma, the established curative pathway is surgery. In a small and highly selected group of patients, liver transplantation may also provide a curative-intent pathway.
The job at diagnosis is to establish whether either pathway could apply before treatment decisions are made that may affect those options.
Experience matters: Curative surgical opportunity should be assessed by clinicians with substantial experience in cholangiocarcinoma and the particular surgical or transplant pathway being considered.
Ask: Is there a curative-intent pathway for me now through surgery or, where relevant, liver transplantation?
Resectable
The cancer is considered able to be completely removed by surgery.
See what this means for you
Visualise the surgeon studying the map. The question is not simply where the cancer is. The question is whether all of it can be removed safely.
The assessment can include tumour location, bile ducts, blood vessels, liver volume, liver function, disease spread and what reconstruction may be required.
Resectable is therefore a surgical judgement. It is not simply a word taken from a scan report.
Many people can contribute to the assessment. The decision on complex CCA resectability should rest with the surgeon who has the relevant high-volume CCA experience.
Experience matters: Complex CCA resectability should only be determined by a surgeon with high-volume cholangiocarcinoma experience who regularly performs complex CCA surgery.
Ask: Has my resectability been assessed directly by a surgeon with high-volume cholangiocarcinoma experience who regularly performs complex CCA surgery?
High-volume CCA experience
Repeated experience assessing and treating cholangiocarcinoma, including complex cases.
See what this means for you
Think of experience as repetition. The more often a clinician manages the same difficult disease, the more experience they gain recognising its variations, barriers and possible solutions.
In CCA, that experience can involve difficult decisions around tumour location, bile ducts, blood vessels, liver volume, reconstruction, biopsy, drainage, transplantation and treatment sequencing.
Complex CCA decisions can close or preserve major treatment opportunities.
Decisions made now can affect which treatments remain possible later.
Do not confuse a medical opinion with a CCA-experienced opinion.
Ask: How often does this clinician assess and treat cholangiocarcinoma, and do they regularly manage cases like mine?
Liver transplant
Replacing the liver with a donor liver as a curative-intent option for a small and highly selected group of patients.
See what this means for you
Think of resection and transplant as two different surgical routes. Resection removes the part containing the cancer. Transplant replaces the liver.
Liver transplantation may be considered in selected patients, particularly some people with localised perihilar cholangiocarcinoma who cannot undergo conventional resection.
A patient can therefore be considered unresectable for conventional surgery but still require a separate transplant assessment.
Some treatment and biopsy decisions can affect liver transplant eligibility.
Important: Certain biopsy routes can affect transplant eligibility because of concern about tumour seeding. If transplant may be relevant, the biopsy plan should be discussed with the transplant team before the procedure.
Experience matters: Transplant eligibility should be assessed by an experienced liver transplant surgeon and transplant program familiar with cholangiocarcinoma protocols.
Ask: Could my tumour type and stage qualify for liver transplant review, and is there anything in my treatment or biopsy plan that could affect that eligibility?
Metastatic
Cancer that has spread from where it started and established cancer in another part of the body.
See what metastatic means
Picture the cancer starting in one place, then some cancer cells travelling and establishing new sites elsewhere.
The cancer where it first developed is called the primary tumour. A new cancer site created after cells spread from that primary tumour is called a metastasis. More than one is called metastases.
Primary cancer develops → some cancer cells leave the original tumour → they travel through blood, lymphatic pathways or nearby tissues → they establish cancer at another site → the cancer is described as metastatic.
Metastatic disease changes the map of the cancer. Treatment planning therefore needs to consider both the original tumour and the known sites of spread.
Metastatic does not mean every patient's situation is the same. The number, location, biology and pattern of spread still matter.
The presence of metastatic disease can change whether conventional surgery is appropriate, but it should not replace understanding exactly where the cancer is, how much disease is present, and which treatment opportunities remain.
CCA-specific experience matters: Where disease extent could close a major treatment opportunity, the treatment plan should be reviewed by clinicians with appropriate cholangiocarcinoma experience.
Ask: Where exactly has the cancer spread, what does that change about my treatment goal, and which treatment opportunities remain open?
Disease control
Treatment aimed at shrinking the cancer or stopping it growing while the next treatment opportunity continues to be assessed.
See what this means for you
Think of this as changing the problem. Surgery may not be possible today, so treatment is used to change what can be changed.
Its immediate job may be to shrink tumours, hold disease stable, improve control in an important location, or maintain enough health and organ function to continue treating.
If the disease changes in the right way, the next treatment decision can also change.
Surgery, liver transplantation review, local treatment, another systemic treatment or a clinical trial may need to be reconsidered as the disease responds.
A no today does not always mean no in the future.
Ask: What exactly does this treatment need to change, and which treatment options will be reconsidered if it succeeds?
Ask: Could an interventional radiologist offer a local treatment that could help control or change my disease? If so, can I be referred to one with high-volume experience treating CCA?
Unresectable
The cancer is not considered able to be completely removed by conventional surgery at the current assessment.
See what this means for you
Picture the barrier, not the label. Something specific is preventing complete and safe removal today.
The job of the assessment is to identify that barrier precisely.
It may involve tumour location, disease spread, blood vessels, bile ducts, future liver volume, liver function or another anatomical or medical factor.
Once the barrier is understood, the next job is to determine whether anything can change it.
CCA-specific experience matters: Before accepting that surgery is not possible, make sure the assessment has come directly from a surgeon with high-volume CCA experience who regularly performs complex CCA surgery.
Ask: I understand surgery is not possible at this time. What exactly is stopping it?
Ask: What would need to change for surgery to become an option?
Ask: What would need to be done, and what can I do to help make that happen?
Ask: Could systemic treatment, radiation, an interventional procedure, liver preparation, transplantation or another strategy change any of those barriers?
Downstaging / conversion to surgery
Treatment that changes the cancer enough for surgery to be reconsidered.
See what this means for you
Visualise two surgical assessments. The first says the cancer cannot be safely removed. Treatment happens between the two assessments.
The treatment's job is to change the disease enough that the second assessment may produce a different answer.
What needs to change will be specific to the barrier that made surgery impossible in the first place.
Reassessment should therefore be planned rather than left to chance.
Disease Control → Change → Reassess → Possible Surgery
CCA-specific experience matters: If treatment succeeds, surgical reassessment should return to a surgeon with high-volume cholangiocarcinoma experience who is capable of evaluating complex CCA surgery.
Ask: If my cancer responds, when will my case be reassessed for surgery, and by whom?
If surgery is still not possible, ask: Is a biopsy now possible where it was not before, or can new tissue be obtained for molecular profiling that may reveal another treatment option?
Palliative intent
A treatment goal used when cure is not currently considered possible.
See what this means for you
The simplest way to understand this is to separate the label from the treatment. Active cancer treatment can continue even when its intent is described as palliative.
Chemotherapy, immunotherapy, targeted therapy, radiation and other treatments can be given with palliative intent to control cancer, extend life or reduce problems caused by the disease.
Palliative intent is different from palliative care. Palliative care can support symptoms and quality of life while active cancer treatment continues.
Before a palliative treatment pathway becomes the working plan, understand whether realistic surgical, transplant, interventional, molecular and clinical-trial opportunities have been assessed.
Important: A palliative treatment classification can affect how later treatment, referral, trial and funding decisions are considered. Some interventions may have clinical, regulatory, Medicare, private insurance or trial eligibility requirements that need to be understood before the pathway is accepted.
Before accepting a palliative pathway, understand which options remain open, which may close, and why.
CCA-specific experience matters: Where a decision could close a major treatment opportunity, ask whether it has been reviewed by clinicians with appropriate high-volume cholangiocarcinoma experience.
Ask: Why is my treatment being classified as palliative, which treatment opportunities have been assessed and ruled out, and who made those assessments?
Ask: Which surgical, transplant, interventional, molecular and clinical-trial opportunities remain open to me?
Ask: Could being classified as palliative affect my eligibility, referral or funding for any treatment or intervention I may want to pursue later?
SECTION 04 | AROUND SURGERY
What needs to happen before and after surgery?
Surgery is not always one decision on one day. Treatment, liver preparation and specialist surgical assessment can change what is possible before an operation. Pathology after surgery helps guide what happens next.
Think of surgery as a pathway, not simply an operation.
Sometimes the cancer needs to change. Sometimes the liver that will remain needs to grow. Sometimes the operation itself requires more complex surgical capability.
If surgery is not possible today, understand exactly what is preventing it before assuming the surgical pathway is closed.
The important question is: “What is preventing surgery, can that barrier change, and when will surgery be reconsidered?”
- Identify the exact barrier to safe complete surgery.
- Ask whether treatment or liver preparation could change that barrier.
- Define what success before surgery needs to look like.
- Plan when and by whom surgical reassessment will occur.
- After surgery, use the pathology to guide what treatment follows.
- “Not operable today” does not always mean “never operable”.
- Resectability is a surgical judgement, not simply a scan description.
- Future liver remnant can itself be the barrier to surgery.
- More complex surgery may require specialist surgical capability.
- After surgery, margins, lymph nodes and pathology help determine what comes next.
BEFORE SURGERY
Can treatment change the surgical opportunity?
Treatment before surgery should have a clear job: what needs to change, how it will be measured, and when surgery will be reconsidered.
Neoadjuvant treatment
Treatment given before a planned operation.
See what treatment before surgery needs to achieve
Think of surgery as the destination and neoadjuvant treatment as preparation before getting there.
Its job may be to shrink or control the cancer, test how the cancer responds, or improve the circumstances in which surgery will be performed.
In some situations, treatment before surgery may change disease that was initially difficult or impossible to remove.
The treatment plan should therefore include what is being measured and when surgical reassessment will occur.
CCA-specific experience matters: When treatment is being used to preserve or create a surgical opportunity, the medical and surgical teams should share a clear understanding of what treatment needs to achieve.
Ask: What exactly does this treatment need to achieve before surgery, and when will my surgeon reassess me?
Conversion therapy
Treatment given with the aim of changing the cancer enough for surgery to become possible.
See what conversion therapy is trying to change
Picture a specific barrier between you and surgery.
Conversion therapy is treatment aimed at changing that barrier.
Its job is not simply to show that the cancer responded. Its job is to create conditions in which complete surgical removal can be reconsidered.
Conversion therapy therefore needs a surgical target: what must change, how will it be measured, and when will reassessment occur?
CCA-specific experience matters: The surgeon reconsidering the operation should have high-volume CCA experience and be capable of assessing the complex surgery that may become possible.
Ask: What specifically needs to change for surgery to become possible?
Ask: Who will reassess me for surgery if treatment succeeds?
MAKING SURGERY POSSIBLE
What exactly is preventing safe complete removal?
The barrier may be the tumour, the amount of liver that would remain, or anatomy that requires a more complex surgical approach.
Borderline resectable
Surgery may be possible, but one or more features make complete and safe removal uncertain or technically difficult.
See what makes surgery borderline
Think of surgery sitting close to the line between possible and not yet safely possible.
The assessment needs to establish exactly what makes the operation difficult.
This may include:
blood vessel involvement,
bile duct involvement,
inadequate future liver remnant,
or another important anatomical factor.
Treatment before surgery, liver preparation or more complex surgical techniques may alter that assessment in selected patients.
A technically difficult operation should lead to a more precise surgical assessment, not automatically to the conclusion that surgery is impossible.
Experience matters: Borderline or technically complex CCA resectability should be determined by a surgeon with high-volume cholangiocarcinoma experience who regularly performs complex CCA surgery.
Ask: What specifically makes my surgery borderline, and could that barrier be changed or managed by a more complex operation?
Future liver remnant
The part of the liver that will remain and continue working after liver surgery.
See why the liver left behind matters
Picture the surgeon removing one part of the liver and asking whether what remains can safely do the work of the whole organ.
The future liver remnant, often shortened to FLR, is assessed for both its size and its ability to function.
If the FLR is too small or its function is marginal, surgery may initially be unsafe.
In selected patients, procedures before surgery can make the future liver remnant larger and create a safer route to resection.
Ask: Is the amount or function of liver that would remain one of the reasons surgery is not possible today?
Ask: If so, can anything be done before surgery to increase it?
Portal or hepatic vein embolisation before surgery
A procedure used in selected patients to help the part of the liver that will remain after surgery grow larger.
See how liver preparation can change the operation
Think of preparing the liver before asking the remaining part to do more work.
Future liver remnant too small → blood flow redirected → remaining liver receives growth signal → liver volume increases → surgery reassessed.
The purpose is to increase the amount of liver available after resection.
In selected situations, portal vein embolisation or combined portal and hepatic vein approaches may be considered as part of preparation for major liver resection.
Experience matters: Whether liver preparation can create a surgical opportunity should be considered by surgical and interventional teams experienced in complex hepatobiliary cancer.
Ask: If future liver remnant is limiting surgery, could portal vein embolisation, hepatic vein embolisation or another liver preparation strategy help make surgery possible?
AFTER SURGERY
What happens around recovery and afterwards?
Surgery does not end when the operation finishes. Recovery, surgical pathology and recurrence-risk assessment help determine what happens next.
Perioperative
The period before, during and shortly after an operation.
See what perioperative care includes
Think of surgery as a whole period of care, not just the operation itself.
Preparation → anaesthesia → operation → immediate recovery → early postoperative care.
Perioperative planning can include nutrition, medicines, anaesthesia, infection prevention, pain management, movement and early recovery.
Ask: What needs to happen before my operation to make surgery and recovery as safe as possible?
Adjuvant treatment
Treatment given after surgery to reduce the risk of the cancer returning.
See why treatment may continue after surgery
Think of surgery as removing what can be found, and adjuvant treatment as treating what may be too small to see.
Its job is to reduce the risk of recurrence after curative-intent surgery.
The recommendation can be influenced by the pathology after surgery.
This can include:
lymph node involvement,
surgical margins,
tumour characteristics,
and other pathological findings.
The decision about adjuvant treatment should therefore be made using the surgical pathology, not simply the fact that surgery has occurred.
Ask: What did my surgical pathology show, and how does that change the benefit I may receive from adjuvant treatment?
Patient-led question: What is preventing surgery now, what can be changed, who will reassess me, and if surgery happens, what will the pathology afterwards determine about my next treatment?
For the operation itself, including liver resection, Whipple surgery, blood-vessel reconstruction, lymph nodes and surgical margins, see Surgery & Surgical Procedures .
SECTION 04A | SURGERY & SURGICAL PROCEDURES
What would surgery actually involve?
The operation depends on where the cancer is, what structures it involves, what must be removed to achieve complete cancer removal, what must be rebuilt, and what healthy anatomy and liver function must safely remain.
Think of the surgeon planning both what must come out and what must still work afterwards.
Cholangiocarcinoma surgery may involve the liver, bile ducts, pancreas, intestine, lymph nodes or major blood vessels.
The important question is not simply: “Can the tumour be operated on?”
It is: “What operation would completely remove the cancer, what would need to be rebuilt, and can that operation be performed safely?”
- Map exactly where the cancer is.
- Define what must be removed with it.
- Understand what must be reconstructed.
- Confirm enough functioning anatomy will remain.
- Use the surgical pathology to guide what happens next.
- CCA surgery is determined by anatomy, not simply tumour size.
- Complete removal is the surgical objective.
- Blood vessel involvement does not automatically make surgery impossible.
- The liver left behind matters as much as the liver removed.
- After surgery, margins and lymph nodes help define what was achieved.
REMOVING THE CANCER
What has to come out?
The operation is shaped by where the cancer starts and which structures must be removed to achieve complete resection.
Resection
Surgery to completely remove the cancer together with the tissue or structures that need to be removed with it.
See what resection is trying to achieve
Picture the cancer as something that must be removed completely, not simply reduced in size.
The surgeon plans an operation that removes the cancer and, where necessary, nearby tissue or structures involved with it.
The required operation can be very different for intrahepatic, perihilar and distal cholangiocarcinoma.
The central surgical question is: can complete removal be achieved safely?
Experience matters: Complex CCA resectability should be determined by a surgeon with substantial cholangiocarcinoma experience who regularly performs the type of complex operation required.
Ask: Is complete surgical removal possible in my case?
If not, ask: What exactly is preventing it, and what would need to change for surgery to become possible?
Liver resection / Hepatectomy
Surgery that removes the part of the liver containing the cancer.
See how liver resection is planned
Picture removing one part of the liver while the part left behind takes over the work.
Hepatectomy may remove part of a liver lobe, an entire lobe, or a larger section depending on the location and extent of the cancer.
Sometimes the main barrier is not whether the tumour can be removed. It is whether enough functioning liver would remain.
If future liver remnant is the barrier, liver-preparation procedures may sometimes increase what will remain before surgery.
Ask: How much liver would need to be removed, and is the liver that would remain large and functional enough?
Extended hepatectomy
A major operation that removes a large part of the liver when a smaller liver resection would not remove all of the cancer.
See what makes an extended hepatectomy possible
Think of the surgeon planning both sides of the operation: what must come out and what must safely remain.
Extended hepatectomy allows a larger area of liver and cancer to be removed when required for complete resection.
If the remaining liver would be marginal in size or function, surgery may initially be unsafe.
Portal vein embolisation and, in selected situations, additional venous approaches can be considered to increase future liver remnant before major resection.
Experience matters: Extended hepatectomy for CCA is major complex liver surgery and requires specialist hepatobiliary surgical assessment.
Ask: Is the barrier to an extended hepatectomy the cancer itself, or the amount or function of liver that would remain?
Bile duct resection
Surgery that removes the section of bile duct containing the cancer.
See what happens to the bile-flow pathway
Picture the bile ducts as branching tubes carrying bile from the liver to the intestine.
Surgery removes the section containing the cancer while preserving or rebuilding a route for bile to drain from the liver.
Depending on tumour location, bile duct resection may be combined with liver surgery, a Whipple procedure or another reconstruction.
Ask: Which bile ducts need to be removed, and how will bile drainage be reconstructed afterwards?
Whipple procedure / Pancreatoduodenectomy
An operation that removes the head of the pancreas, lower bile duct, gallbladder and duodenum. In some operations, part of the stomach is also removed.
See why a Whipple involves several organs
Picture several connected pipes meeting in one small area.
To remove the cancer completely, the surgeon may need to remove several connected structures and then rebuild the digestive pathway.
Cancer-bearing area removed → remaining pancreas connected → bile drainage reconstructed → digestive tract reconnected → food, bile and pancreatic juices can move again.
Experience matters: Pancreatoduodenectomy is major surgery. For distal CCA, assessment should include experience with this cancer and the reconstruction required.
Ask: What structures will need to be removed in my Whipple, and how will they be reconstructed?
Combined hepatectomy and pancreatoduodenectomy
A highly complex operation combining major liver resection with a Whipple procedure.
See why this operation is highly specialised
Think of two major operations being combined into one.
The operation attempts to remove cancer involving anatomy that requires both major liver resection and pancreatoduodenectomy.
Important: This is a highly complex and high-risk operation. Where considered, specialist centre and surgeon experience are particularly important.
Ask: Why is this combined operation being considered in my case, what alternatives have been assessed, and how experienced is the centre in performing it?
REBUILDING & PROTECTING
What must be reconstructed or preserved?
Complex CCA surgery may require blood vessels or other anatomical pathways to be rebuilt while preserving adequate function.
Blood vessel resection and reconstruction
Removing part of a major blood vessel involved with the cancer and rebuilding the vessel so blood can continue to flow.
See how a blood vessel can become part of the operation
Picture the tumour involving an important blood vessel beside or within the surgical area.
If appropriate, the involved section of vessel can be removed with the cancer and the blood-flow pathway reconstructed.
Portal vein resection may be considered in selected locally advanced perihilar CCA. Arterial resection is a more complex and less settled situation.
The question is not only:
“Is a vessel involved?”
It is:
“Can the vessel be safely removed
and reconstructed
while achieving complete cancer removal?”
CCA-specific experience matters: This assessment requires a surgeon experienced in complex CCA surgery and vascular reconstruction.
Ask: Is blood vessel involvement the reason surgery has been ruled out, and has vascular reconstruction been assessed by a surgeon who regularly performs this type of complex CCA surgery?
STAGING & SURGICAL PATHOLOGY
What did surgery reveal and remove?
Surgery can provide information that scans cannot fully establish. Lymph nodes, margins and unexpected disease can all change the final picture.
Lymph node dissection / Lymphadenectomy
Removing lymph nodes near the cancer so they can be examined for cancer cells.
See why lymph nodes are examined
Think of lymph nodes as checkpoints around the area of the tumour.
Removing and examining them helps determine whether cancer cells have moved beyond the primary tumour.
If cancer is found, the number and location of involved nodes become part of the pathological staging.
Ask after surgery: How many lymph nodes were removed, how many contained cancer, and what does that mean for my next treatment decision?
Staging laparoscopy
A keyhole procedure used in selected patients to look inside the abdomen for disease that may not have been clear on scans.
See why this may happen before major surgery
Think of it as a final look before committing to the larger operation.
A camera is inserted through small incisions so the surgeon can inspect the abdomen for unexpected spread.
Staging laparoscopy has a selective role. It is not required for every patient with biliary tract cancer.
Ask: Would staging laparoscopy add useful information before my planned surgery, or is my imaging sufficient in my case?
Surgical margin
The cut edge of the tissue removed during surgery.
See what the pathologist examines
Picture the removed cancer surrounded by the edge of the tissue the surgeon took with it.
The pathologist examines that edge under the microscope.
Tissue removed → cut edges identified → margins examined microscopically → R0, R1 or another margin status reported.
Ask: Were my surgical margins clear, and were any margins particularly close?
R0 resection
No cancer cells are seen under the microscope at the cut edges of the tissue removed during surgery.
See what R0 means
Picture a clear microscopic border around the removed cancer.
R0 means the pathologist did not see cancer cells at the surgical edges examined.
Margin status becomes part of the information used to understand recurrence risk and plan treatment after surgery.
Ask: Was an R0 resection achieved, and what do my margins mean for my next treatment decision?
R1 resection
The visible cancer has been removed, but cancer cells are seen under the microscope at one or more surgical margins.
See the difference between R0 and R1
Think of the visible tumour being removed, but the microscope finding cancer cells reaching the cut edge.
The important next detail is which margin was involved and what that means in the context of the operation performed.
Ask: Which margin was involved, where is it anatomically, and how does that change what should happen next?
R2 resection
Surgery where visible cancer remains because it could not be completely removed.
See the difference between R1 and R2
Picture the difference: R1 means microscopic cancer reaches a margin. R2 means visible cancer remains.
The next treatment decision should identify exactly what disease remains and where it is.
Remaining disease may require systemic treatment, radiation, interventional treatment or another strategy depending on location and biology.
Ask: Where exactly does cancer remain, why could it not be removed, and what treatment options are available for it now?
Patient-led question: What operation would be required to completely remove my cancer, what would need to be removed or reconstructed, what must safely remain, and what will the surgical pathology tell us afterwards?
SECTION 04B | BILIARY MANAGEMENT & DRAINAGE
What is stopping the bile from flowing?
Liver cells called hepatocytes make bile. Picture those hepatocytes as working Cell Cities connected to an intricate living plumbing system.
Bile enters microscopic channels, then progressively larger bile ducts lined by living cells called cholangiocytes, before flowing toward the intestine.
When flow fails, the problem can begin with the bile, the plumbing, or both. Understanding where flow is failing determines what needs to happen next.
First map the plumbing. Then understand what is stopping the flow.
Visualise the path: hepatocyte Cell Cities → bile canaliculi → cholangiocyte-lined ducts → larger bile ducts → duodenum.
The ducts are living structures. Cholangiocytes lining them help modify bile, regulate its composition and protect the duct surface.
Flow can fail because bile becomes harder to move, because the plumbing becomes narrowed or blocked, or because both problems occur together.
Drainage is therefore not simply “putting in a stent”. The anatomy, obstruction, functioning liver, surgical pathway and next treatment can all change the drainage plan.
Restore the right flow, not simply any flow.
- Map where bile is meant to flow.
- Identify exactly where flow is failing and why.
- Restore drainage from the part of the liver that needs it.
- Protect surgery, transplantation and other treatment opportunities when choosing the drainage method.
- Watch for signs that the drainage pathway has stopped working.
- Poor bile flow can begin with the bile, the plumbing, or both.
- The location of a blockage matters because it determines what is trapped upstream.
- A stent is one tool inside a drainage strategy.
- Drainage choices can affect surgery, transplantation and later procedures.
- Fever, jaundice or worsening blood tests can mean drainage has failed.
UNDERSTAND THE FLOW
Where should bile be moving, and what is stopping it?
Begin with the normal flow pathway. Then identify whether the problem is bile quality, a physical obstruction, or both.
Bile flow
The movement of bile from liver cells, through the biliary plumbing, and into the intestine.
See how bile moves through the system
Picture the biliary system as living plumbing. Hepatocyte Cell Cities make bile. Tiny bile canaliculi begin collecting it before it enters progressively larger cholangiocyte-lined ducts.
Healthy bile
+ open plumbing
→ bile moves forward.
Bile becomes harder to move,
plumbing narrows or blocks,
or both
→ flow slows
→ bile stagnates
→ pressure and inflammation can increase.
Poor flow and stagnation can reinforce one another. Slower flow can allow bile to become more concentrated, while sludge, crystals, inflammation or structural obstruction can make flow more difficult.
Ask: What is stopping my bile from flowing properly: the bile itself, the plumbing, or both?
Bilirubin and bile flow
When bile cannot drain properly, bilirubin can build up in the bloodstream.
See the connection
Think of bilirubin as waste that normally leaves through the bile pathway.
Liver processes bilirubin
→ bilirubin enters bile
→ bile flows through the ducts
→ bilirubin leaves through the intestine.
Bile duct becomes blocked
→ bile backs up
→ bilirubin can rise
in the bloodstream.
Bilirubin has one canonical explanation in Blood Tests & Tumour Markers.
Ask: Is my bilirubin rising because bile is blocked, and is the trend showing that drainage is improving or failing?
Biliary obstruction
A narrowing or blockage that prevents bile from moving normally through part of the biliary system.
See why the location of the blockage matters
Picture a blockage somewhere inside an intricate branching plumbing system.
The effect depends on where the blockage sits and which ducts feed into it.
Obstruction can result from tumour, a stricture, inflammation, stones, sludge, debris, or a drainage device that is no longer functioning properly.
Ask: Where exactly is my obstruction, what is causing it, what part of the liver sits upstream from it, and what is the best way to restore flow?
RESTORE THE RIGHT FLOW
Which ducts need drainage, and how should it be done?
Drainage should restore bile flow from the liver that needs it while protecting future treatment opportunities.
Biliary drainage
Creating or restoring a route for bile to leave an obstructed part of the biliary system.
See what successful drainage is trying to achieve
Think of drainage as creating a working route through or around the blockage.
Drainage can be internal, external, or a combination, depending on the anatomy and how the blocked ducts can best be reached.
In complex perihilar disease, branches of the biliary system may be separated from one another.
The aim may therefore be to drain selected functioning liver segments, rather than every visible duct.
Experience matters: Complex biliary drainage should be planned with disease location, detailed duct anatomy, functioning liver and the surgical pathway in view.
Ask: What part of my biliary system needs drainage, why that part, and how will we know the drainage is working?
Future liver remnant drainage
Draining the part of the liver that is planned to remain after major liver surgery.
See why the planned remaining liver matters
Picture the operation before the drain is placed. Part of the liver may be removed. The remaining part will need to carry the workload.
That remaining part is called the future liver remnant, or FLR.
In selected patients with perihilar cholangiocarcinoma, drainage may therefore be directed specifically toward the ducts serving the future liver remnant.
Ask: Which part of my liver is planned to remain, and is that the part being drained?
Biliary stent
A tube placed inside a narrowed or blocked bile duct to create or maintain a pathway for bile flow.
See why the stent choice matters
Think of a stent as equipment placed inside the plumbing.
Its job is to hold open or create a route through a narrowed duct.
Stents can be plastic or metal. Metal stents can also be covered or uncovered.
Those differences affect how long a stent may remain open, whether it can later be removed, and how it may affect future procedures.
A stent is not the strategy. It is one piece of the strategy.
Ask: Why is this particular stent being recommended, exactly where will it sit, and could that choice affect surgery or another treatment I may need later?
Plastic biliary stent
A removable plastic tube placed inside a bile duct to maintain drainage.
See why a removable stent may be chosen
Think of this as a removable piece of plumbing equipment.
Plastic stents have a smaller internal diameter than most self-expanding metal stents and may become blocked.
Their removability can be useful when further diagnostic work, changing drainage needs, surgery or another procedure remains possible.
Ask: Why has a plastic stent been chosen, when should it be reviewed, and is there a planned removal or exchange date?
Metal biliary stent
A self-expanding metal tube placed inside a bile duct to create a wider drainage pathway.
See why future treatment matters before placement
Picture a mesh tube expanding inside a narrowed duct to create a wider channel.
Metal stents may be covered, partially covered or uncovered.
Some can become difficult or impossible to remove endoscopically.
This is why the surgical and transplant pathway needs to be understood before certain metal stents are placed.
Ask: Is surgery or liver transplantation still a possibility for me, and could this metal stent make either pathway more difficult?
KEEP THE FLOW WORKING
How will drainage be monitored, and what happens if it fails?
A working drainage pathway can later block, move or become infected. Know who owns the plan and what warning signs matter.
Biliary stent management
The ongoing plan for monitoring a biliary stent and acting when it needs review, exchange or removal.
See what you should know about your stent
Think of the stent as equipment that needs an owner.
You should know: what type of stent you have, where it is, who is responsible for it, whether it has a planned exchange or removal date, and what symptoms should trigger earlier review.
Recognising drainage failure early may prevent worsening jaundice, cholangitis, liver dysfunction and interruption of cancer treatment.
Ask: Who owns my stent, when is it due for review, and what symptoms or blood-test changes mean I should seek help sooner?
Blocked biliary stent
A biliary stent that is no longer allowing bile to drain adequately.
See the signs that drainage may have failed
Picture a drain that was working but has stopped flowing.
A stent can stop working because of tumour growth, sludge, debris, migration, or another obstruction elsewhere in the biliary system.
New jaundice, dark urine, pale stools, itching, fever or worsening liver blood tests can mean drainage needs reassessment.
Ask: Could my symptoms or blood results mean my stent is no longer draining properly, and does it need to be checked, cleared, repositioned or replaced?
Cholangitis
Infection and inflammation within the biliary system, often associated with bile that is not draining properly.
See why infection and drainage may both need treatment
Picture infection developing behind poorly draining plumbing.
Antibiotics treat the infection. But if a blockage or failed stent is contributing, the drainage problem may also need treatment.
Urgent: Fever, chills, worsening abdominal pain, jaundice, confusion, low blood pressure or sudden deterioration can indicate serious infection. Suspected cholangitis requires urgent medical assessment.
Ask: Is poor bile drainage contributing to this infection, and does my stent or drainage pathway need treatment as well as antibiotics?
HOW THE DUCTS ARE REACHED
Which route gives the best access to the blocked ducts?
Bile ducts can be approached from inside the digestive system, through the liver, or by a specialised ultrasound-guided internal route.
ERCP
An endoscopic procedure that reaches the bile-duct opening from inside the digestive system.
See how ERCP reaches the bile ducts
Picture approaching the biliary plumbing from inside.
Mouth → oesophagus → stomach → duodenum → bile-duct opening.
A flexible endoscope follows this route. Instruments can then enter the bile duct to obtain cells or tissue, restore drainage, or place a stent.
Ask: What exactly are we trying to achieve with this ERCP: diagnosis, tissue, drainage, stenting, or more than one of these?
PTC / PTBD
A percutaneous approach that reaches the bile ducts through the skin and liver using image guidance.
See how the ducts are reached through the liver
Think of this as approaching the biliary plumbing from outside.
PTC uses imaging to enter and map the bile ducts through the liver. PTBD uses that access to establish drainage.
The catheter can drain externally, internally, or in both directions.
Ask: Why is the percutaneous route being recommended, what part of my biliary system will it drain, and how will we know it is working?
EUS-guided biliary drainage
A drainage route created using endoscopic ultrasound when the normal bile-duct outlet cannot be used or adequately accessed.
See how another internal drainage route can be created
Picture creating a new internal exit from the blocked plumbing into the digestive system.
Endoscopic ultrasound is used to locate the biliary system and guide creation of the drainage pathway.
This is a specialised procedure and is not the standard route for every biliary obstruction.
Ask: Why is EUS-guided drainage being considered instead of ERCP or percutaneous drainage in my case?
Patient-led question: Where exactly is my bile flow failing, which part of the liver needs drainage, what method best restores that flow, what future opportunity must be protected, and how will I know if the drainage stops working?
SECTION 05 | TREATMENT SEQUENCE
Understanding what comes first, what comes next, and why
Cancer treatment may be described as first-line, second-line, later-line, maintenance, a regimen or a treatment cycle. These terms tell you where treatment sits in the sequence, how it is organised and what happens next.
Treatment is not only what you receive. Sequence matters.
What happens now can shape what remains possible next. Imaging, biopsy, drainage, surgery, transplant assessment, systemic treatment and other interventions may need to occur in a particular order.
Before accepting the next step, understand what it is trying to achieve and what future options it could affect.
Understand the purpose of the next step before taking it.
- Know your current clinical starting point.
- Know where you are in the systemic treatment sequence.
- Understand exactly how the treatment is organised.
- Protect treatment opportunities that may matter later.
- Reassess the whole option set whenever something changes.
- First-line means the first major systemic treatment, not simply the first treatment of any kind.
- A treatment line can contain several medicines.
- A regimen is the treatment recipe.
- A cycle is one repeating block inside that regimen.
- When treatment changes, the whole option set should be reviewed again.
WHERE AM I STARTING?
What is shaping the treatment decision?
Your current function and the established treatment pathway are two important parts of understanding where the plan begins.
ECOG Performance Status
A scale doctors use to describe how much illness is affecting your ability to carry out normal daily activities.
See what your ECOG score means
Think of ECOG as a snapshot of how well you are functioning today.
It gives the treatment team a common way to describe how much illness is limiting normal activity.
ECOG is not your cancer stage. It describes your current level of physical function, and it can change over time.
ECOG 0
→ fully active.
ECOG 1
→ able to carry out light daily activity,
but limited in strenuous activity.
ECOG 2
→ able to look after yourself
and be up and about
for more than half the waking day,
but unable to work.
ECOG 3
→ able to do only limited self-care
and spending more than half
the waking day
in bed or a chair.
ECOG 4
→ unable to carry out self-care
and completely confined
to bed or a chair.
A change in ECOG can change which treatments a clinician believes your body can safely tolerate.
ECOG is also commonly used in clinical-trial eligibility. A recorded performance status can therefore affect access to standard treatment and trial opportunities.
Ask: What ECOG performance status has been recorded for me, and is it affecting any treatment or clinical-trial option?
Standard of care
The treatment or care approach currently accepted as an established option for a particular clinical situation.
See what standard of care means
Think of standard of care as the established starting point, not automatically the end of the treatment discussion.
The term is used for treatment or care accepted within a particular disease setting, stage, treatment line or patient group.
The standard can change as stronger evidence emerges, new treatments are approved, guidelines change, or the treatment setting changes.
Standard of care does not mean “the only possible care”.
Tumour biology, previous treatment, surgical opportunity, transplant eligibility, clinical trials and individual circumstances can create additional decisions beyond the standard pathway.
Ask: When you say this is the standard of care, what exactly is standard for someone in my situation, and what other reasonable options should I understand?
WHERE AM I IN THE TREATMENT SEQUENCE?
First-line, second-line and later-line
These terms describe where a systemic treatment sits in the sequence of drug treatments.
First-line treatment
The first main systemic treatment used for the cancer.
See where first-line treatment sits
First establish whether surgery offers a curative opportunity.
If surgery is possible, the treatment pathway may begin with surgery rather than systemic treatment.
If surgery is not currently possible, first-line systemic treatment may be recommended.
If that systemic treatment later stops working, cannot be continued, or another treatment becomes more appropriate, the next systemic treatment is called second-line treatment.
Ask: Is surgery a current option for me? If not, what is stopping surgery now, could treatment change that, and what is my first-line systemic treatment?
Second-line treatment
The next systemic treatment used after first-line systemic treatment has stopped working, cannot be continued, or another option has become more appropriate.
See why the treatment is changing
Think of second-line as the next systemic treatment decision.
Something has changed, so the treatment options need to be reviewed again.
This may be because the cancer has grown, treatment has stopped working, side effects make continuation unsafe, or another treatment has become more appropriate.
This is a point to reconsider all available options, including targeted therapy, immunotherapy, clinical trials, local treatments and whether a surgical opportunity has changed.
Ask: What changed that means my first-line systemic treatment is no longer the best option?
Ask: What are all my treatment options now, and why is this second-line treatment being recommended?
Later-line treatment
Systemic treatment used after two or more earlier systemic treatment lines.
See what later-line really means
Think of each systemic treatment line as another chapter in the drug-treatment plan.
A later-line treatment is chosen after reviewing what you have already received, how the cancer responded, what side effects occurred and what options remain.
Your cancer may also have been tested more extensively by this stage, revealing biomarkers, mutations or trial opportunities that were not previously known.
New treatments, trials and access pathways can emerge over time. The option set should therefore be reviewed again.
Ask: What options are available to me now that were not available, relevant or known when my earlier treatments were chosen?
Line of therapy
A way of describing where a systemic cancer treatment sits in the sequence of systemic treatments.
See how treatment lines are counted
Picture your systemic treatment history as a series of steps.
First-line → second-line → later-line.
The term helps describe which major systemic treatment phase you are currently receiving and which systemic treatments have already been used.
A line does not necessarily equal one medicine. A combination treatment can still be one line of therapy.
Line = where you are in the systemic treatment sequence.
Ask: What line of systemic therapy am I on now, and what treatments have already counted as earlier lines?
HOW IS THE TREATMENT ORGANISED?
Regimen, cycle and combination
These terms describe what treatment you receive, how the parts fit together and how the schedule repeats.
Treatment regimen
The exact treatment recipe: which medicines or treatments you receive, how much you receive and when you receive them.
See how your treatment recipe is organised
Think of a regimen as the recipe for your treatment.
The regimen sets out the treatment combination, dose, timing, treatment days and planned cycle structure.
A regimen may change because of side effects, blood results, kidney or liver function, treatment response or another clinical reason.
Regimen = what treatment you receive and how it is scheduled.
Ask: What exactly is my regimen, what medicines are included, what is the schedule, and how long is it planned to continue?
Treatment cycle
One repeating block of treatment and recovery time within a treatment regimen.
See how a cycle fits inside a regimen
Think of a cycle as one lap around a repeating track.
One cycle may contain several treatment days followed by days without treatment. The next cycle then begins.
Scans and blood tests may be scheduled after a certain number of cycles to check how the cancer and your body are responding.
Cycle = one repeating block inside the regimen.
Ask: How long is one cycle of my treatment, which days will I receive treatment, and when will my response be checked?
Combination therapy
Two or more treatments used together as part of the same treatment strategy.
See why treatments are sometimes combined
Think of combination therapy as approaching the problem from more than one direction.
The treatments may act on different parts of cancer biology, or one treatment may support the effect of another.
Combination treatment can also increase side effects, which is why each part should have a clear purpose.
A combination can still count as one line of systemic therapy.
Ask: What is each treatment in this combination doing, and why are they being used together?
WHAT HAPPENS AFTER THE MAIN PHASE?
Maintenance or a treatment break
Treatment may continue in a simplified form or be deliberately paused. Understand which one is happening and what triggers the next decision.
Maintenance therapy
Ongoing treatment used after an earlier treatment phase to help keep the cancer controlled.
See what changes during maintenance
Think of maintenance as keeping pressure on the cancer after the heavier first phase has finished.
The aim is usually to maintain disease control while reducing treatment burden or toxicity.
Maintenance may involve fewer medicines, a different dose or a different schedule.
The important distinction is whether treatment has been deliberately simplified or whether it has stopped altogether.
Ask: What has changed in my treatment, what is being continued, what has been stopped, and what is maintenance expected to achieve?
Treatment break
A planned period when treatment is temporarily paused.
See what should happen during a treatment break
Think of a treatment break as a planned pause, not automatically the end of the treatment road.
A break may allow the body to recover, reduce side effects or provide time away from treatment while the cancer remains controlled.
Some breaks are planned. Others occur because blood results, side effects, infection, procedures or another medical issue make interruption necessary.
The important part is knowing why the break is happening, what is being monitored and what will trigger treatment restarting.
Ask: Why are we pausing treatment, how long is the break expected to last, what will be monitored, and what will determine when treatment restarts?
Patient-led question: Where am I in the treatment sequence, what is this next step meant to achieve, what could it change or close, and what will make us reassess the plan?
SECTION 06 | TREATMENT RESPONSE
Is the treatment working?
Treatment response describes what changed after treatment, whether the treatment is doing its job, how long any benefit lasts, and what that result means for the next decision.
Do not stop at “better”, “stable” or “progression”.
A response result becomes useful when you understand what changed, where it changed, by how much, how long that change lasted, and what it changes next.
Response tells you what happened. Duration tells you whether it lasted.
- Establish how the cancer is being measured.
- Identify exactly what changed.
- Name the response using the appropriate criteria.
- Understand whether the response is continuing.
- Use the result to reassess what should happen next.
- A scan response is based on defined measurements, not just an impression.
- Stable disease can still mean treatment is controlling the cancer.
- Progression should trigger a fresh treatment review.
- A response rate does not tell you how long responses lasted.
- Complete response and NED describe what can be seen now. Neither term by itself proves cure.
HOW IS RESPONSE MEASURED?
What exactly is being compared?
Response criteria provide a repeatable way to compare scans and describe whether measurable cancer has shrunk, remained controlled or progressed.
RECIST 1.1
A standard set of rules used to measure how solid tumours have changed on scans.
See how RECIST measures change
Think of RECIST as the measuring rule used on the scan.
Selected tumours are measured before treatment and then measured again on later scans. Those measurements are compared using the same rules.
Under RECIST 1.1, a partial response generally requires at least a 30% decrease in the combined size of target lesions.
Progressive disease generally requires at least a 20% increase from the smallest previous measurement, together with at least a 5 mm absolute increase, or the appearance of a new lesion.
A tumour can become somewhat smaller or somewhat larger without automatically crossing a formal RECIST threshold.
Ask: Was my response formally assessed using RECIST 1.1, and what measurements changed?
Measurable disease
Cancer that can be measured reliably on imaging using defined measurement rules.
See which lesions can be measured
Picture the radiologist choosing lesions that can be measured consistently from scan to scan.
Those measurements create a baseline that later scans can be compared against.
Under RECIST 1.1, many non-lymph-node lesions generally need to measure at least 10 mm on CT to qualify as measurable. Lymph nodes have separate size rules.
Ask: Which of my lesions are measurable, and which measurements are being followed over time?
Target lesion
A measurable cancer lesion selected to be formally measured and followed on later scans.
See what the radiologist is following
Think of target lesions as the measuring points.
Their measurements are added together and compared with earlier scans to help determine response.
Ask: Which lesions were selected as my target lesions, and how has each one changed?
Non-target lesion
Cancer that is followed on scans but is not included in the formal target-lesion measurements.
See what happens to disease that is not formally measured
Not everything visible on the scan becomes a measuring point.
Non-target disease is still reviewed for disappearance, persistence or clear worsening.
Ask: What happened to my non-target disease, not just the lesions that were formally measured?
WHAT DID THE TREATMENT DO?
Complete response, partial response, stable disease or progression
The response category describes what the cancer did during treatment. The important next step is understanding what that result changes.
Complete response (CR)
At this assessment, the cancer being measured can no longer be seen under the response criteria being used.
See what complete response does and does not mean
The measurable disease has disappeared from the scan assessment.
Under RECIST 1.1, complete response requires disappearance of the relevant disease being assessed.
Important: Complete response records what was seen at that assessment. It does not mean the response will necessarily continue on the next scan.
CR = complete response
at an assessment.
Ongoing CR =
complete response
that continues
on later assessments.
Follow-up matters because a patient can achieve complete response and later develop recurrent or progressive disease.
Ask: Is this my first complete response, or has the complete response remained ongoing on later scans?
Partial response (PR)
The measured cancer has shrunk enough to meet the formal threshold for a partial response.
See what partial response may change
The treatment has pushed measurable cancer backwards.
Cancer can still be visible, but it has reduced enough to qualify formally as a response.
For some patients, a strong response may justify asking whether an option that was previously unavailable, including surgery or another local treatment, should now be reassessed.
Ask: By what percentage has my measurable disease changed, and does this response reopen any treatment options?
Stable disease (SD)
The cancer has not changed enough to qualify as either partial response or progressive disease.
See why stable disease can still matter
Stable does not mean nothing happened.
A treatment may be successfully holding the cancer without shrinking it enough to qualify as partial response.
Some lesions may shrink slightly, while others remain similar, without the overall result crossing a formal RECIST threshold.
Ask: How long has the disease been stable, what changed within that stable result, and is continuing this treatment still the best option?
Progressive disease (PD)
The cancer has worsened enough to meet the criteria for progression.
See why progression is a decision point
Progression is a decision point, not the end of the road.
Under RECIST 1.1, progression may result from sufficient growth in measured target lesions, clear worsening of non-target disease, or appearance of new cancer lesions.
Do not stop at the word “progression”. Find out exactly what progressed, where it progressed and by how much.
Progression should lead to a fresh review of systemic treatments, biomarkers, targeted therapy, immunotherapy, clinical trials, local treatments and whether any surgical opportunity exists.
Ask: What exactly progressed, by how much, was there a new lesion, and does this meet formal RECIST progression?
Mixed response
Some areas of cancer are responding while others are stable or growing.
See why individual lesions may matter
One part of the cancer may be moving backwards while another part is moving forwards.
Mixed response is a useful clinical description, but it is not one of the four main RECIST 1.1 response categories.
The important question is whether the resistant or growing area can be treated differently while an effective treatment continues to control the rest of the disease.
Ask: Which lesions are responding, which are not, and can the resistant area be treated separately?
DID THE RESPONSE LAST?
A response and a durable response are not the same thing
The response category tells you what happened. Duration tells you whether that benefit continued. Immunotherapy can also occasionally complicate how early scans are interpreted.
Duration of response (DoR)
How long a confirmed treatment response lasts before the cancer progresses or returns.
See why response duration changes how results are read
Getting a response and keeping a response are two different questions.
In clinical trials, duration of response is used to measure how long a complete or partial response continues.
A patient may be recorded as having achieved complete response even if the cancer later returns. The response remains part of the trial result, while duration tells you how long it lasted.
Important when reading trial results: A high response rate does not tell you by itself whether those responses lasted. Look for duration of response, progression-free survival, and whether responses were still ongoing when results were reported.
Response = did it work?
Duration = how long
did it keep working?
Ask: How many patients responded, how long did those responses last, and how many were still responding when the trial results were reported?
Pseudoprogression / iRECIST
An immune-treatment situation where a scan may initially appear worse before later assessment shows that the cancer is not truly progressing.
See why immunotherapy may require another look
An early scan can sometimes look worse before the true direction becomes clear.
iRECIST is an immune-response framework developed mainly for immunotherapy trials. It can label an initial progression result as unconfirmed progression, or iUPD, until later assessment determines whether progression is confirmed.
Pseudoprogression is not an explanation to assume. Genuine cancer progression is more common. The clinical situation and later assessment matter.
Ask: Because I am receiving immunotherapy, is this definitely confirmed progression, or is there a clinical reason to consider immune-response criteria?
WHAT HAPPENS AFTERWARDS?
NED, recurrence and the next treatment decision
A good response can continue, disease can remain undetectable, or cancer can return. Each new state should trigger the next appropriate decision.
No evidence of disease (NED)
At this point in time, no cancer can be detected using the tests being performed.
See what NED means over time
The tests cannot currently find detectable cancer.
Important: NED means no cancer can be detected now. It does not mean the cancer cannot return on a later scan.
NED = current state.
Ongoing NED =
that state continuing
over time.
Follow-up remains important because recurrence can still occur even when no disease is currently detectable.
Ask: How long have I remained NED, and what surveillance will determine whether it continues?
Recurrence
Cancer that has returned after treatment or after a period when it could not be detected.
See why recurrence requires a new map
The cancer has returned, so the treatment map needs to be redrawn.
The next step is to establish where the cancer has returned, how much disease is present, whether tissue or genomic information is needed, and what treatments are now possible.
Recurrence should be reassessed rather than simply assuming the treatment pathway must continue from where it left off.
Ask: Where exactly has the cancer returned, is it removable or locally treatable, and what are all my treatment options now?
Local recurrence
Cancer that has returned in or near the original tumour or treatment area.
See why location changes the next decision
The cancer has returned near where the original problem was.
Local recurrence should prompt a fresh assessment of surgery, radiation, interventional treatments and systemic treatment, rather than assuming only one pathway remains.
Ask: Is this recurrence confined enough for surgery or another local treatment to be considered?
Patient-led question: What exactly changed, how was it measured, what response category does that create, is the benefit continuing, and what treatment opportunity should now be reconsidered?
SECTION 07 | BIOMARKERS & GENOMIC PROFILING
What did the test find?
A pathology or genomic report is not simply a list of mutations. It contains information about the biology of the cancer that may change or expand what treatment is possible.
UNDERSTAND THE RESULT
First understand what was tested. Then understand what was found.
A result only becomes useful when you know what the test was capable of finding, what exact change was detected, and whether that change creates a treatment, clinical-trial or inherited-risk question.
A report can also be important because of what is missing. A result that is not recorded is not automatically negative.
What was tested → What was found → What does it change → What opportunity does it create → What is still missing?
- Understand what the test actually examined.
- Identify the exact result, not only the gene name.
- Understand what that result is doing inside the cancer.
- Ask whether it creates a treatment, immunotherapy, clinical-trial or inherited-risk opportunity.
- Check what important information was not tested, not found or not reported.
- A gene name alone is not enough. The exact change matters.
- Different tests can look for different types of genetic change.
- Some important changes are better detected using RNA as well as DNA.
- A result may create an established treatment, a clinical-trial question, an inherited-risk question, or no established treatment link today.
- Not recorded does not mean negative.
START HERE
Understand the test before using the result
Before using any biomarker or genomic result, first understand what was tested, what type of change the test could detect, what was actually found, and what important information may still be missing.
Cell City
Think of each cell in your body as a tiny working city. Cell City gives you one consistent picture for understanding genes, genetic changes, proteins and many of the words you will see on a cancer report.
See the Cell City story
Begin with me
I am the whole person. I have a genome, the complete set of genetic instructions for building and running me.
My body is made of trillions of cells. Think of each cell as a Cell City.
Almost every Cell City carries its own copy of my genome inside its nucleus.
Picture it like this: one person, one genome, with a copy of that genome carried inside almost every Cell City.
Meet the Cell City
These are the characters used consistently throughout Cholangio.org. Each one represents something real inside your cells.
CELL CITY → CITY HALL → VOLUMES OF CITY PLANS → CHAPTERS OF CITY INSTRUCTIONS → CITY PLANNER → WORKING PLAN → FACTORY → CITY ASSET
Where does DNA fit?
DNA remains the actual genetic material containing the instructions.
In Cell City, chromosomes are the Volumes of City Plans. DNA is what those volumes are made from, and genes are the Chapters of City Instructions written within them.
Chromosome = the organised volume.
DNA = the instruction material inside it.
Gene = a specific chapter of instructions.
How does Cell City use an instruction?
Cell City does not use every gene at once. A particular gene is selected when that instruction is needed.
An enzyme called RNA polymerase reads that selected gene.
Think of RNA polymerase as the City Planner.
The City Planner does not decide which instruction is needed. Its job is to read the gene that has been selected and make an RNA copy of it.
That RNA copy is messenger RNA, or mRNA.
Think of mRNA as the Working Plan.
The original DNA instruction remains inside City Hall. The Working Plan can leave City Hall and travel to a ribosome.
Think of the ribosome as the Factory.
The Factory reads the Working Plan and builds the protein described by that instruction.
That protein is the City Asset.
Gene instruction → City Planner reads it → Working Plan is made → Factory reads the Working Plan → City Asset is built.
What is a City Asset?
A City Asset is a protein.
Protein is the category. Different proteins perform different jobs inside or on the surface of the Cell City.
The names below are examples you may encounter on a cholangiocarcinoma pathology or genomic report.
The distinction that makes reports easier to understand
The gene is the Chapter of City Instructions. The protein is the City Asset built from that instruction.
The FGFR2 gene is the instruction. The FGFR2 protein is the growth-signal receiver built from that instruction.
The KRAS gene is the instruction. The KRAS protein is the growth switch built from that instruction.
The IDH1 gene is the instruction. The IDH1 protein is the metabolic enzyme built from that instruction.
How can a normal Cell City become abnormal?
Damage or alteration comes first. Changed function can follow.
DNA can be altered by biological pressures on the cell, environmental or internal damage, or mistakes that occur when DNA is copied.
Normally, many mistakes are repaired, and cells that are too badly damaged can be removed.
If damage is not repaired and an abnormal cell survives, that cell may continue dividing.
Further alterations can accumulate. Normal controls over growth, survival and cell behaviour can progressively fail.
Abnormal daughter cells can then survive, multiply and form growing populations.
Those cells do not all have to remain identical. As they continue dividing, different cells can accumulate different mutations and other changes.
This can create increasingly varied populations of cancer cells within the same tumour.
At the same time, prolonged biological stress and repeated immune activity can contribute to immune dysfunction and exhaustion.
If immune surveillance becomes less able to recognise or remove abnormal cells, those altered cell populations have more opportunity to survive and progress.
Biological pressure or copying error → DNA alteration → repair or removal fails → damaged cell survives → function changes → abnormal growth or survival → further changes accumulate → immune control may weaken → cancer can progress.
What can happen to a Chapter of City Instructions?
Genetic change can take several forms.
A mutation can change DNA letters.
A fusion can join parts of two gene instructions together.
An amplification can create too many copies of an instruction.
A deletion can remove part or all of an instruction.
Other structural changes can rearrange how an instruction is organised or used.
If an altered gene continues to be used, the City Planner can copy that altered instruction into the Working Plan.
The Factory can then use that altered Working Plan to build an altered City Asset.
Change the instruction → change the Working Plan → potentially change the City Asset → potentially change how the Cell City behaves.
Now picture some cholangiocarcinoma examples
A damaged KRAS gene can produce an altered KRAS growth switch that keeps signalling when it should stop.
An FGFR2 fusion can create an abnormal growth-signalling instruction.
HER2 amplification can create extra copies of the HER2 instruction, which can lead to excessive HER2 signalling equipment.
Changes affecting MLH1, PMS2, MSH2 or MSH6 can weaken the DNA mismatch-repair system, allowing copying errors to accumulate more easily.
When you read your report, ask: Is this result describing a gene instruction, a change to that instruction, the protein City Asset it builds, or the effect that changed Asset is having on my cancer?
Antigen
Something the immune system can specifically recognise.
See how the immune system recognises an antigen
Picture each Cell City displaying tiny samples of what is happening inside it.
Proteins inside the cell are continually broken into small pieces called peptides.
Some of those peptides are carried to the cell surface and displayed by molecules called MHC.
Think of MHC as the display holder. It presents the peptide so a T cell can inspect it.
Protein → peptide → displayed by MHC → T cell inspects it.
Recognition does not automatically mean attack
An antigen is something the immune system can recognise.
Recognition does not automatically mean that the immune system will attack it.
The immune system regularly encounters features from normal cells without launching a destructive response.
Recognition and immune attack are not the same thing.
What changes in cancer?
Cancer cells can contain altered genes and make altered proteins.
Those altered proteins can produce peptide fragments that differ from what the immune system normally sees.
If one of those displayed peptides can be recognised by the immune system as associated with the cancer, it can act as a tumour antigen.
A neoantigen is a new antigen created by a tumour-specific genetic alteration.
Altered gene → altered protein → altered peptide → displayed by MHC → potential tumour antigen.
Why this matters for immunotherapy
A T cell needs to recognise an antigen before it can specifically identify the cell displaying it.
But recognition alone is not enough. Other immune signals influence whether the T cell activates, remains inactive, or is suppressed.
This is why antigen presentation, T-cell activation, PD-1, PD-L1 and CTLA-4 belong to the same immune story.
Antigen asks:
“What does the T cell recognise?”
Immune-control signals ask:
“Will the T cell act?”
Ask: What is the immune system recognising on the cancer, and is anything preventing my T cells from acting on that recognition?
Receptor
A protein that receives or responds to a biological signal.
See how a receptor works
Think of a receptor as a receiver installed in or on the Cell City.
The receptor is a protein City Asset. Its shape allows particular molecules to interact with it.
When the appropriate signal binds or interacts with the receptor, the receptor can change what happens inside the cell.
Depending on the receptor, that signal may affect growth, survival, metabolism, immune activity, or communication with other cells.
Examples you may meet in cancer include FGFR2, HER2, EGFR and PD-1.
Receptor = the receiver.
Ligand = a molecule that binds to the receiver.
Pathway = what happens after the signal is received.
Ask: What receptor is involved, what does it normally do, and is that receptor or its pathway altered in my cancer or treatment?
Ligand
A molecule that binds to a receptor and influences what that receptor does.
See how a ligand works
Think of the receptor as the receiver and the ligand as the signal that connects to it.
A ligand binds to a receptor because their molecular shapes and chemistry allow them to interact.
That interaction can activate, strengthen, reduce, or inhibit a biological pathway, depending on the receptor involved.
In immune checkpoints, PD-L1 and PD-L2 are ligands for PD-1.
B7 molecules, including CD80 and CD86, can interact with receptors including CD28 and CTLA-4.
Ligand binds receptor → receptor changes activity → biological signal changes.
Ask: Which ligand and receptor are interacting here, and does that interaction activate or suppress the pathway?
Molecular / Genomic Profiling
Testing the cancer's genetic material for changes that may help explain how the cancer is behaving.
See what genomic profiling is looking for
Think of genomic profiling as examining parts of the Cell City's instructions looking for meaningful changes.
In the Cell City model, genes are Chapters of City Instructions.
Molecular testing can look for changes to those instructions, including mutations, fusions, rearrangements, amplifications and deletions.
Many tests examine DNA. Some also examine RNA.
RNA testing can be particularly useful for detecting some gene fusions and understanding whether an altered instruction is being expressed.
Test ordered → what material was tested → what genes were examined → what types of change could be detected → what exact result was found.
Not every genomic test is the same
Different tests examine different genes and different types of genetic change.
A test that looks for mutations does not necessarily detect every fusion, rearrangement, amplification or other alteration.
A report that does not mention a particular biomarker therefore does not automatically mean that biomarker was tested and found negative.
Not reported does not automatically mean negative.
The exact change matters
Finding the name of a gene is only the beginning.
The treatment question usually depends on the exact alteration.
For example, a mutation, fusion or amplification affecting the same gene can have different biological and treatment meanings.
Gene name → exact alteration → biological effect → treatment relevance.
What should happen after a result is found?
Each potentially important result should be translated into a clinical question.
Does it create an approved treatment?
Does it create a clinical-trial opportunity?
Does it raise an inherited-risk question that may require germline testing?
Or is it a biological finding with no established treatment link today?
Ask: What exactly was tested, what exact alterations were found, what important alterations could this test miss, and does any result change or expand my treatment options?
Cholangio.org Pathology / IHC Testing Checklist
A patient-held checklist for checking important pathology, immunohistochemistry and related biomarker results in cholangiocarcinoma.
View the pathology and IHC patient checklist
Use this checklist when reviewing your pathology report or discussing what testing still needs to be completed.
Some of these results may appear directly on the pathology report. Others may be reported through molecular testing.
MMR proteins, PD-L1 and HER2 can be assessed using immunohistochemistry. MSI is usually assessed using a molecular method such as PCR or sequencing.
or
pMMR
+
scoring method
or clarify a 2+ result
Not recorded does not mean negative. If a biomarker does not appear on the report, confirm whether it was not requested, not performed, unable to be completed, or reported somewhere else.
Tested → result reported → result understood → treatment relevance checked.
Ask: Which of these biomarkers have actually been tested, what are my exact results, and is anything important still missing?
Cholangio.org Genomic / Molecular Profiling Checklist
A patient-held checklist for checking the important results on a cholangiocarcinoma genomic or molecular report.
View the genomic patient checklist
Use this checklist before molecular testing is ordered, or use it to audit a report you already have.
Not every result below comes from the same type of test.
Some biomarkers are assessed on tumour tissue by pathology or IHC. Others are measured through DNA or RNA testing.
The important question is not simply: “Was molecular testing done?”
The important questions are: what material was tested, which biomarkers were examined, what types of alteration could be detected, and what exact results were found.
Test ordered → what was actually tested → what was found → what does it change → what is still missing?
First check the immune and HER2 results
or
pMMR
+
scoring method
Not recorded does not mean negative. If one of these biomarkers does not appear on the report, confirm whether it was not requested, not performed, unable to be completed, or reported somewhere else.
Ask: Which immune and HER2 biomarkers have actually been tested, what are my exact results, and is anything important still missing?
Then check the genomic targets
or rearrangement
or another exact variant
+
laboratory classification
Some fusions and rearrangements may be missed if the test or specimen is not suited to detecting them. Ask whether RNA testing was included where it was needed.
Not recorded does not mean negative. If a target is missing, ask whether it was not requested, not performed, unable to be completed, outside the panel, or reported somewhere else.
Gene name → exact alteration → biological meaning → treatment relevance → trial relevance.
Ask: Have the important genomic targets actually been checked, what are my exact results, and which findings change or expand my treatment options?
NGS / Next-Generation Sequencing
NGS is a way of reading many selected parts of the cancer's genetic instructions at the same time.
See what this means for you
Think of NGS as reading many Chapters of City Instructions in one test, rather than checking one gene at a time.
Some panels are small and focused. Others examine hundreds of genes.
Different panels can detect different types of alteration, including mutations, copy-number changes, fusions and rearrangements.
A DNA-only panel may answer many important questions, but some fusions are better detected when RNA is also examined.
NGS does not mean
“everything was tested.”
Ask what genes were included,
what types of change
the test could detect,
and whether RNA
was included where needed.
Ask: What did my NGS panel actually test, did it include the DNA and RNA methods needed for important cholangiocarcinoma alterations, and what could it have missed?
Mutation / Gene Change
A mutation is a change in the DNA letters within a gene, one Chapter of City Instructions.
See what this means for you
DNA can change through copying errors, biological pressures, or other forms of damage.
Many changes are repaired. Some damaged cells are removed.
If an altered cell survives and continues dividing, that changed instruction can be passed into daughter cells.
One mutation may weaken a gene's normal job. Another may leave a growth pathway switched on. Another may have no established clinical significance.
Gene name → exact mutation → biological effect → clinical relevance.
Ask: What exact mutation did my report find, what is it believed to do, and does that exact change alter my treatment options?
Somatic Mutation
A somatic mutation is a genetic change acquired in cells during your lifetime.
See what this means for you
Tumour testing tells you what genetic changes were found in the cancer sample.
A tumour result alone may not prove whether a particular alteration is inherited or acquired.
Certain tumour findings may therefore trigger a separate germline-testing question.
Ask: Is this considered a tumour-only change, or does this result mean I should also have germline testing?
Germline Mutation
A germline mutation is a genetic change present from birth and generally carried throughout the body.
See what this means for you
A tumour test can sometimes raise suspicion that a genetic change may be inherited.
A dedicated germline test, usually using blood or saliva, is generally needed to answer that question.
Ask: Does this tumour result create a reason for germline testing or genetic counselling?
Germline Testing
Germline testing checks whether a genetic change is present in the inherited DNA you were born with.
See what this means for you
Germline testing usually uses blood or saliva rather than tumour tissue.
If an inherited pathogenic alteration is confirmed, the result may matter for your treatment, cancer surveillance, and biological relatives.
Ask: Does anything in my tumour report, personal history or family history justify germline testing or genetic counselling?
Gene Fusion / Rearrangement
A gene fusion occurs when parts of genetic instructions become joined in an abnormal arrangement.
See what this means for you
Picture two Chapters of City Instructions being joined together in a way that was never intended.
DNA can break and be rearranged. If pieces are rejoined abnormally, part of one gene can become connected to part of another.
The new fused instruction can produce an abnormal City Asset with altered behaviour.
FGFR2, NTRK and RET are examples where a confirmed fusion can be clinically important.
Ask: Did my test use the DNA and RNA methods needed to detect clinically important fusions, and was a true fusion confirmed?
Gene Amplification
Gene amplification means the cancer cell has gained extra copies of a gene.
See what this means for you
Picture one Chapter of City Instructions being copied far too many times.
More copies can sometimes produce more Working Plans and more of the protein built from that gene.
HER2 / ERBB2 is an important example where amplification may have treatment relevance.
Ask: How strong is this amplification, what effect is it having, and does it change my treatment options?
Copy Number Alteration
A copy number alteration means the cancer cell has gained or lost copies of a section of DNA.
See what this means for you
A copy-number gain means extra copies are present.
A copy-number loss means copies have been removed.
Amplification is a form of copy-number gain, but the degree of gain and the gene involved determine its significance.
Ask: What exact copy-number change was found, and is it biologically or clinically important?
VUS / Variant of Uncertain Significance
A VUS is a genetic change that has been found, but current evidence is not strong enough to know whether it is harmful.
See what this means for you
The laboratory can see that the DNA sequence differs, but there is not yet enough evidence to classify its effect confidently.
Classification can change as more evidence becomes available.
VUS = found, but not yet understood well enough to call pathogenic or benign.
Ask: Is this still classified as a VUS, should it influence any decision now, and should it be reviewed again later?
Actionable Alteration
An actionable alteration is a result that can lead to a specific clinical action.
See what this means for you
Actionable can mean different things in different reports.
A result may support an approved treatment, a treatment used in another cancer type, a clinical trial, germline testing, or another defined next step.
Do not stop at:
“This is actionable.”
Ask:
“What action does it create for me?”
Ask: Which findings on my report are actionable now, and what exact action does each one create?
Repeat Molecular Testing
Molecular testing may sometimes be repeated because the cancer can change over time.
See what this means for you
A genomic result describes the cancer at the time and place sampled.
After treatment or progression, the dominant cancer population may be different.
Repeat testing may use new tissue or, in some settings, circulating tumour DNA from blood.
Ask: Has enough changed in my cancer to justify repeating molecular profiling, and what specimen would give the best answer?
CATEGORY 1
Results that may create a treatment pathway
These biomarkers can create a specific targeted-treatment question. The exact alteration, cancer setting, treatment line and access pathway still matter.
IDH1 Mutation
IDH1 normally makes a metabolic enzyme. Certain IDH1 mutations change what that enzyme does.
See what this means for you
Think of IDH1 as part of Cell City's metabolic machinery.
Certain mutations, commonly involving the R132 position, change the enzyme so it produces an abnormal metabolite called 2-HG.
2-HG can interfere with systems that help cells regulate gene activity and mature normally.
Ask: What exact IDH1 mutation do I have, and does that exact result create an ivosidenib treatment option for me?
FGFR2 Fusion / Rearrangement
FGFR2 normally produces a growth-signal receptor. A fusion or rearrangement can create an abnormal growth signal.
See what this means for you
The FGFR2 gene is a Chapter of City Instructions for building an FGFR2 receptor, a growth-signal City Asset.
If FGFR2 becomes fused or rearranged, the altered instruction can produce abnormal signalling.
RNA testing can be important in detecting some FGFR2 fusions.
Ask: What exact FGFR2 fusion or rearrangement was found, was the testing method capable of detecting it reliably, and which FGFR-targeted options match my result?
HER2 / ERBB2
HER2 is a growth-signal receptor on the cell surface. Too much HER2 activity can strengthen cancer growth signalling.
See what this means for you
Think of HER2 as a growth-signal receiver installed on the Cell City boundary.
Too many ERBB2 gene copies, too much HER2 protein, or certain mutations can increase HER2 signalling.
HER2 IHC may be reported as 0, 1+, 2+ or 3+.
Protein expression, gene amplification and mutation are not interchangeable results.
Ask: What type of HER2 result do I have, what is the exact score or alteration, and which treatment does that exact result support?
BRAF V600E
BRAF is part of an internal growth-signalling pathway. The V600E mutation can leave that pathway abnormally active.
See what this means for you
BRAF is one part of an internal signalling relay that carries growth messages through the Cell City.
V600E is a specific alteration. Other BRAF variants are not automatically equivalent.
Ask: Is my BRAF result specifically V600E, and what treatment opportunity does that exact result create?
MEK
A signalling protein that helps carry growth instructions through the cell.
See where MEK sits in the pathway
RAS passes the signal to RAF.
RAF passes it to MEK.
MEK passes it to ERK.
ERK then helps carry the growth instruction toward the cell's control systems.
MEK is not itself a mutation result. It is one of the signalling relays that can be targeted when a cancer is using this pathway.
Ask: Is MEK relevant because of a specific alteration in my cancer, and does that alteration create a treatment or clinical-trial option?
NTRK Fusion
An NTRK fusion is a structural gene change that can create abnormal TRK growth signalling.
See what this means for you
The important result is a true fusion involving NTRK1, NTRK2 or NTRK3.
A gene name appearing on a report is not the same thing as confirming an actionable fusion.
Ask: Was a true NTRK fusion confirmed, and which TRK-targeted treatment matches that result?
RET Fusion
A RET fusion can create abnormal growth signalling that helps drive the cancer.
See what this means for you
RET normally produces a signalling protein. A fusion can create an abnormal instruction that keeps the pathway active.
Ask: Was a true RET fusion confirmed, and does that result create a RET-targeted treatment option?
NRG1 Gene Fusion
An abnormal joining involving the NRG1 gene that can create a cancer-driving growth signal.
See why the exact fusion matters
Picture two Chapters of City Instructions being joined together in the wrong way.
An NRG1 fusion can produce an abnormal growth signal that activates HER-family receptors on cancer cells.
This altered signalling can help the cancer continue growing and surviving.
NRG1 fusion → abnormal growth signalling → treatment opportunity.
In May 2026, the FDA approved zenocutuzumab-zbco for adults with advanced, unresectable or metastatic NRG1 fusion-positive cholangiocarcinoma after progression on or after prior systemic therapy.
Ask: Does my report confirm a true NRG1 gene fusion, and does my disease and previous treatment match the current zenocutuzumab treatment setting?
CATEGORY 2
Results that may affect an immunotherapy decision
MSI, mismatch repair, tumour mutational burden and PD-L1 measure different parts of tumour and immune biology. No single result tells the whole story.
MSI / Microsatellite Instability
MSI measures a pattern of DNA-copying errors in repeated sections of the genome.
See what MSI-H, MSI-L and MSS mean
Think of microsatellites as short repeated pieces of DNA that make copying errors easier to detect.
MSI-H / MSI-High
MSI-H means a high level of microsatellite instability was detected.
This often occurs when the mismatch-repair system is not working normally.
MSI-L / MSI-Low
MSI-L means a lower level of instability was detected.
It is not equivalent to MSI-H.
MSS / Microsatellite Stable
MSS means the test did not find the MSI-H pattern.
MSS does not answer every other question about immunotherapy.
Ask: What is my exact MSI result: MSI-H, MSI-L, MSS, or was MSI not tested?
MMR / Mismatch Repair
Mismatch repair is one of Cell City's DNA proofreading and repair systems.
See what dMMR and pMMR mean
The four proteins
Look for: MLH1, PMS2, MSH2 and MSH6.
They work in paired systems: MLH1 / PMS2 and MSH2 / MSH6.
The pathology report may describe each protein as retained, intact, lost or absent.
dMMR / Mismatch Repair Deficient
dMMR means the mismatch-repair system is deficient.
When repair fails, DNA-copying errors can accumulate.
pMMR / Mismatch Repair Proficient
pMMR means the tested mismatch-repair proteins appear retained rather than lost.
pMMR does not create the dMMR biomarker pathway, but it does not answer every other immunotherapy question.
Ask: Were all four MMR proteins tested, what was reported for each one, and is my tumour dMMR or pMMR?
TMB / Tumour Mutational Burden
TMB estimates how many mutations were found across a defined amount of tumour DNA.
See what this means for you
Think of TMB as a mutation count across a defined amount of the tumour's DNA.
The report should state the numeric result, the units, the testing method, and how the laboratory classifies the result.
More mutations can create more altered proteins and potentially more abnormal peptide antigens for the immune system to recognise.
That biological idea is why TMB can matter when immunotherapy is being considered.
TMB is not simply:
high = immunotherapy,
low = no immunotherapy.
It is one result
that must be interpreted
with the cancer,
assay,
treatment setting
and other biomarkers.
Ask: What is my exact TMB score, how did the laboratory classify it, and does this result change an immunotherapy or clinical-trial option for me?
PD-L1
PD-L1 is a ligand, an immune-control protein that can bind PD-1 and reduce T-cell activity.
See what this means for you
Think of PD-L1 as one immune-control signal a cancer cell or other cells in the tumour environment may display.
PD-L1 can bind the PD-1 receptor on T cells and reduce their activity.
A report may use a scoring system such as TPS or CPS, depending on the assay and cancer setting.
PD-L1 is not the same biomarker as MSI, MMR or TMB.
These biomarkers answer different biological questions.
PD-L1 score is information, not a complete prediction of whether immunotherapy will or will not work.
Ask: Was PD-L1 tested, what score was reported, what scoring method was used, and does that result change any treatment or trial decision for me?
CATEGORY 3
Other gene changes found on reports
These findings may still matter. Some create clinical-trial, inherited-risk or future-treatment questions. The exact alteration and evidence level must be checked.
ATM Alteration
ATM helps Cell City detect serious DNA damage and organise the repair response.
See what this means for you
Think of ATM as part of the Cell City's damage-alarm system.
Ask: What exact ATM alteration do I have, is it pathogenic, could it be inherited, and does it create a clinical-trial opportunity?
KRAS Mutation
KRAS produces an internal growth switch inside Cell City. Certain mutations can leave that switch abnormally active.
See what this means for you
Do not stop at the word KRAS.
The specific alteration, such as G12D, G12C or another variant, determines which research and treatment questions are relevant.
Ask: What exact KRAS mutation do I have, and which trials or emerging treatments match that exact variant?
BRCA1 Alteration
BRCA1 helps repair serious DNA damage.
See what this means for you
BRCA1 is part of a high-precision DNA repair system.
Ask: Is my BRCA1 alteration pathogenic, could it be inherited, and does it create a treatment or clinical-trial opportunity?
BRCA2 Alteration
BRCA2 helps repair serious DNA damage.
See what this means for you
BRCA2 works in a high-precision DNA repair pathway.
Ask: Is my BRCA2 alteration pathogenic, could it be inherited, and does it create a treatment or clinical-trial opportunity?
PALB2 Alteration
PALB2 helps the BRCA repair machinery work together.
See what this means for you
Ask: Is my PALB2 result pathogenic, could it be inherited, and does it change my treatment or trial options?
TP53 Alteration
TP53 helps stop severely damaged cells from continuing to divide.
See what this means for you
Think of TP53 as one of Cell City's major damage-control and safety systems.
Ask: What exact TP53 alteration do I have, and does it change any treatment, testing or trial question?
ARID1A Alteration
ARID1A helps organise DNA so the cell can control which genes are available to be read.
See what this means for you
Ask: Is my ARID1A alteration pathogenic, and is there a clinical trial that matches it?
BAP1 Alteration
BAP1 contributes to gene regulation, DNA-related processes and cellular quality control.
See what this means for you
Ask: Is my BAP1 result pathogenic, could it be inherited, and does it create a clinical-trial opportunity?
PBRM1 Alteration
PBRM1 helps organise DNA and regulate which genetic instructions are available to read.
See what this means for you
Ask: Is my PBRM1 result pathogenic, and does it qualify me for any clinical trial?
CDKN2A Alteration
CDKN2A helps control whether a cell is allowed to continue dividing.
See what this means for you
Ask: What exact CDKN2A alteration do I have, and does it create a clinical-trial opportunity?
CDKN2B Alteration
CDKN2B contributes to control of the cell-division cycle.
See what this means for you
Ask: What exact CDKN2B alteration do I have, and does it create a clinical-trial opportunity?
PIK3CA Alteration
PIK3CA is part of a major pathway controlling cell growth, survival and metabolism.
See what this means for you
Ask: Is my PIK3CA alteration believed to be activating, and does it create a clinical-trial option?
SMAD4 Alteration
SMAD4 helps carry important growth-control signals inside the cell.
See what this means for you
Ask: What does my exact SMAD4 result mean, and does it change any treatment or trial question?
IDH2 Alteration
IDH2 produces a metabolic enzyme that works mainly inside mitochondria.
See what this means for you
Some IDH2 mutations can also produce the abnormal metabolite 2-HG.
Ask: Is my result IDH1 or IDH2, what exact mutation was found, and what treatment or trial options match it?
MET Alteration
MET produces a cell-surface receptor involved in growth, movement and repair signalling.
See what this means for you
Ask: What exact MET alteration was found, what does that specific change do, and does it create a treatment or clinical-trial option?
NF1 Alteration
NF1 helps turn down RAS growth signalling after the message has been delivered.
See what this means for you
Ask: Is my NF1 alteration pathogenic, could it be inherited, and does it create a clinical-trial opportunity?
PTEN Alteration
PTEN is an important brake on the PI3K-AKT growth and survival pathway.
See what this means for you
Ask: What does my exact PTEN result mean, and does it create a clinical-trial opportunity?
STK11 Alteration
STK11 helps cells respond to energy stress and regulate growth.
See what this means for you
Ask: What does my exact STK11 alteration mean, and does it change any treatment or clinical-trial option?
Another Gene Change
Your report may contain a gene or alteration that is not yet listed in this library.
See what this means for you
The important questions remain the same: what exact alteration was found, what does current evidence say it does, and does it create an action?
Ask: What exactly does this result mean, is it pathogenic, and does it create any treatment, trial or inherited-risk question?
SECTION 07A | CANCER TREATMENTS & MEDICINES
What is this treatment trying to interrupt?
Every cancer treatment has a job. Understanding that job helps you understand why the treatment may fit your cancer, what it is trying to achieve, and what opportunity should be protected next.
A treatment does not usually repair the original change that caused the cancer.
Instead, treatment often interrupts something the cancer now depends on: DNA copying, a growth signal, an altered protein, or an immune-control pathway.
In Cell City, the treatment may interfere with the DNA inside the Volumes of City Plans, an altered Chapter of City Instructions, the Working Plan, a protein City Asset, or the signals controlling how that Asset behaves.
Goal → Target → Job → Why it fits → What comes next.
- Know what treatment needs to achieve in your case.
- Understand what part of the cancer the treatment is targeting.
- Understand the treatment's job in plain language.
- Know why that treatment fits your cancer or treatment setting.
- Protect the next opportunity if the treatment works, stops working, or cannot be tolerated.
- Treatment goal and treatment name are not the same thing.
- Chemotherapy can work without a specific mutation.
- Targeted treatment usually depends on the exact biomarker and exact alteration.
- Biological relevance does not automatically mean immediate access to a medicine.
- Every treatment decision should preserve what may still be possible next.
FIRST-LINE SYSTEMIC TREATMENTS
Treatments commonly used first for advanced disease
Systemic treatments travel through the body rather than treating only one tumour site. Gemcitabine and cisplatin combined with checkpoint immunotherapy are established first-line approaches for advanced biliary tract cancer.
Gemcitabine + Cisplatin + Durvalumab
A three-medicine treatment combining two chemotherapies with a PD-L1 checkpoint immunotherapy.
See how this treatment works
What is it? Gemcitabine and cisplatin are chemotherapy medicines. Durvalumab is a checkpoint immunotherapy.
Gemcitabine interferes as the cell tries to make new DNA.
Cisplatin damages and cross-links DNA, making those instructions harder to read and copy.
Durvalumab blocks PD-L1, a ligand that can bind PD-1 and reduce T-cell activity.
Two medicines interfere with cancer-cell replication. The third blocks an immune-control signal.
Why might I be given it? It may be used as initial systemic treatment for advanced, metastatic or unresectable biliary tract cancer when the patient is not currently on a curative surgical pathway.
What makes it relevant to me? A specific mutation is not required. Disease extent, organ function, previous treatment, general health and treatment goal all matter.
Ask: What is this combination trying to achieve in my case, and what opportunity are we trying to create or protect if it works?
Gemcitabine
A chemotherapy medicine that interferes as cancer cells try to make new DNA before dividing.
See how this medicine works
Gemcitabine resembles one of the building pieces needed to make DNA.
The cell takes it into the new DNA copy, disrupting the copying process.
Gemcitabine does not repair the cancer's altered instructions. It interferes with the cancer cell's attempt to reproduce them.
Why might I be given it? It is commonly combined with other medicines to shrink, slow or control cholangiocarcinoma.
What makes it relevant to me? A particular mutation is not required.
Ask: What job is gemcitabine doing in my treatment combination, and how will we know whether the treatment is working?
Cisplatin
A platinum chemotherapy medicine that damages and cross-links DNA.
See how this medicine works
Cisplatin creates links between parts of the DNA.
The cancer cell then has more difficulty reading and copying those instructions.
Cisplatin does not correct the cancer's DNA. It damages DNA the cancer cell depends on to keep reproducing.
What makes it relevant to me? A particular mutation is not required. Kidney function, hearing, general health and previous treatment can affect suitability.
Ask: Is cisplatin the best platinum medicine for me, and if it is not, what alternative is being considered and why?
Carboplatin
A platinum chemotherapy medicine that damages DNA and may sometimes be considered when cisplatin is not suitable.
See how this medicine works
Carboplatin creates DNA damage that can make it harder for the cancer cell to read, copy and survive with those instructions.
Carboplatin and cisplatin have a similar broad job, but their dosing and side-effect profiles are not identical.
Ask: Why is carboplatin being considered instead of cisplatin in my case?
Durvalumab / Imfinzi
A checkpoint immunotherapy that binds PD-L1 and blocks one immune-control signal that can reduce T-cell activity.
See how this medicine works
PD-1 is a receptor on the T cell.
PD-L1 is a ligand that can bind PD-1 and reduce T-cell activity.
Durvalumab binds PD-L1 and interrupts that checkpoint interaction.
Durvalumab does not directly damage the cancer's DNA. It blocks one way cancer can suppress immune activity.
What makes it relevant to me? When durvalumab is used with gemcitabine and cisplatin as first-line advanced BTC treatment, a positive PD-L1 result or specific mutation is not required.
Ask: What job is durvalumab doing in my combination, and how does that fit the treatment goal in my case?
Gemcitabine + Cisplatin + Pembrolizumab
A three-medicine treatment combining two chemotherapies with a PD-1 checkpoint immunotherapy.
See how this treatment works
Gemcitabine interferes with DNA copying.
Cisplatin damages and cross-links DNA.
Pembrolizumab binds PD-1 on T cells and blocks checkpoint signalling through that receptor.
Two medicines interfere with cancer-cell replication. The third blocks an immune-control pathway.
What makes it relevant to me? A specific mutation is not required for the first-line combination.
Ask: What is this combination trying to achieve in my case, how will we measure response, and what decision follows from that result?
Pembrolizumab / Keytruda
A checkpoint immunotherapy that binds PD-1 on immune T cells.
See how this medicine works
PD-L1 and PD-L2 can bind PD-1 and reduce T-cell activity.
Pembrolizumab binds PD-1 and blocks that checkpoint interaction.
Pembrolizumab does not directly damage the cancer cell. It blocks one immune-control pathway.
Why might I be given it? It can be used with gemcitabine and cisplatin as first-line treatment for advanced biliary tract cancer. It can also become relevant in biomarker-defined settings.
What makes the biomarker question different? MSI-H, dMMR and TMB describe different aspects of tumour biology. Their relevance depends on the exact result, treatment setting and access pathway.
Ask: Am I receiving pembrolizumab as part of first-line combination treatment, because of a biomarker-defined indication, or for another reason?
AFTER-SURGERY & LATER-LINE CHEMOTHERAPY
Treatments used after surgery or after an earlier treatment
Treatment after surgery is trying to reduce recurrence risk. Later-line treatment is used after an earlier systemic treatment has stopped controlling advanced disease. These are different treatment settings with different goals.
Capecitabine / Xeloda
An oral chemotherapy medicine commonly considered after curative-intent surgery for biliary tract cancer.
See how this medicine works
What is it? Your body converts capecitabine into 5-FU, a chemotherapy medicine.
Any remaining cancer cells may be too small to see on scans.
If those cells try to make new DNA and divide, 5-FU interferes with that process.
Capecitabine cannot prove that hidden cancer cells remain. Its job is to reduce the chance that any remaining cells establish recurrent disease.
Ask: What is my individual recurrence risk after surgery, what benefit are we expecting from capecitabine, and how long is the planned course?
FOLFOX
A chemotherapy combination of 5-FU, leucovorin and oxaliplatin used as a later-line option in advanced biliary tract cancer.
See how this treatment works
5-FU disrupts systems needed to make new DNA.
Leucovorin strengthens part of 5-FU's effect.
Oxaliplatin damages and cross-links DNA.
FOLFOX makes it harder for the cancer cell to make, read and reproduce its genetic instructions.
Why might I be given it? It can become relevant when advanced biliary tract cancer progresses after earlier systemic treatment.
Ask: Why is FOLFOX the preferred next treatment in my case, and what biomarker-matched or clinical-trial options should be reviewed at the same decision point?
Fluorouracil / 5-FU
A chemotherapy medicine that interferes with systems cells need to make new DNA.
See how this medicine works
5-FU disrupts the chemistry and machinery needed to make that new DNA.
5-FU does not repair the cancer's DNA. It interferes with the copying system cancer cells need to multiply.
Leucovorin / Folinic acid
A medicine given with 5-FU to strengthen part of 5-FU's effect.
See how this medicine works
Leucovorin is the helper. It strengthens part of 5-FU's effect rather than being the main cytotoxic medicine itself.
Oxaliplatin
A platinum chemotherapy medicine that damages and cross-links DNA.
See how this medicine works
BIOMARKER-MATCHED TARGETED TREATMENTS
Treatments selected because of a specific tumour finding
A biomarker can identify a biological vulnerability that a treatment may target. The exact alteration, treatment setting, evidence and access pathway still matter.
Biological match → Evidence → Treatment setting → Access.
Ivosidenib / Tibsovo
An IDH1-targeted medicine used in cholangiocarcinoma with a treatment-matching IDH1 mutation.
See how this medicine works
Instead of performing only its normal job, the changed enzyme produces 2-HG.
Ivosidenib inhibits the mutant IDH1 enzyme, reducing 2-HG production.
Ivosidenib does not repair the IDH1 mutation. It blocks what the altered protein is doing.
Ask: Does my report confirm a treatment-matching IDH1 mutation, and is ivosidenib appropriate and accessible in my treatment setting?
Pemigatinib / Pemazyre
An FGFR-targeted medicine for previously treated locally advanced or metastatic cholangiocarcinoma with an FGFR2 fusion or rearrangement.
See how this medicine works
An FGFR2 fusion can produce abnormal signalling without normal control.
Pemigatinib inhibits FGFR signalling.
Pemigatinib does not repair the FGFR2 fusion. It blocks the signalling produced by it.
Ask: What exact FGFR2 fusion or rearrangement was found, and does my treatment setting match the pemigatinib indication?
Futibatinib / Lytgobi
An FGFR-targeted medicine for previously treated advanced or unresectable FGFR2-altered cholangiocarcinoma in the relevant treatment setting.
See how this medicine works
Futibatinib binds FGFR proteins and inhibits that signalling.
Futibatinib does not repair the FGFR2 alteration. It blocks the signalling the alteration is producing.
Ask: What exact FGFR2 alteration do I have, does it match the treatment indication, and is futibatinib accessible to me now?
Zanidatamab / Ziihera
A HER2-targeted antibody developed for HER2-positive cancers, including biliary tract cancer in defined treatment settings.
See how this medicine works
Zanidatamab binds HER2 at two different sites.
This disrupts HER2 signalling and can also help recruit immune activity against the cancer cell.
Zanidatamab does not remove the HER2 alteration. It targets the HER2 protein City Asset.
Access matters: a HER2 finding can create biological relevance without automatically establishing Australian registration, PBS funding or individual eligibility.
Ask: What exact HER2 result do I have, does it match the evidence for zanidatamab, and what access pathway is available to me?
Trastuzumab deruxtecan / Enhertu
A HER2-targeted antibody-drug conjugate that uses HER2 to deliver a cancer-killing payload toward tumour cells.
See how this medicine works
The antibody recognises HER2.
Attached to it is a cancer-killing payload.
After delivery, the payload can damage the targeted cell and may affect nearby tumour cells.
Enhertu does not repair HER2. It uses HER2 as a delivery address.
Australian indication: the TGA solid-tumour indication applies to adults with unresectable or metastatic HER2-positive IHC 3+ solid tumours after prior systemic treatment when there is no satisfactory alternative treatment option.
Ask: What is my exact HER2 IHC result, does it match the current indication, and is Enhertu accessible in my treatment setting?
Zenocutuzumab / Bizengri
A targeted antibody treatment for advanced cholangiocarcinoma with an NRG1 gene fusion in the defined treatment setting.
See how this medicine works
Zenocutuzumab binds two HER-family receptors, HER2 and HER3.
By blocking this interaction, it interrupts NRG1-driven growth signalling.
Zenocutuzumab does not repair the NRG1 fusion. It blocks the growth-signalling pathway the fusion is driving.
Who does the FDA approval apply to? Adults with advanced, unresectable or metastatic NRG1 fusion-positive cholangiocarcinoma whose disease has progressed on or after prior systemic therapy.
Australian access: FDA approval does not automatically establish Australian registration or PBS funding. The current Australian access pathway should be checked.
Ask: Does my tumour have a confirmed NRG1 fusion, have I reached the treatment setting covered by the evidence, and what access pathway is available to me?
Dabrafenib + Trametinib
Two targeted medicines used together to interrupt BRAF-MEK signalling in cancers with a BRAF V600E mutation.
See how this treatment works
BRAF is one relay.
MEK is downstream.
BRAF V600E can keep the pathway active.
Dabrafenib inhibits BRAF.
Trametinib inhibits MEK.
The mutation is not repaired. The pathway it drives is interrupted at two connected points.
Ask: Is my BRAF result specifically V600E, and what treatment or access pathway does that exact result create for me?
Larotrectinib / Vitrakvi
A TRK-targeted medicine for eligible cancers driven by an NTRK gene fusion.
See how this medicine works
The new instruction can produce an abnormal TRK protein City Asset that keeps signalling.
Larotrectinib inhibits that TRK signalling.
Larotrectinib does not repair the fusion. It blocks the growth signal produced by it.
Ask: Was a true NTRK fusion confirmed, does it match the treatment indication, and is larotrectinib accessible to me?
Entrectinib / Rozlytrek
A targeted medicine that inhibits TRK signalling in eligible cancers with an NTRK fusion.
See how this medicine works
That altered protein can send persistent growth signals.
Entrectinib inhibits TRK signalling.
Entrectinib does not repair the fusion. It blocks the signal the fusion creates.
Ask: Was a true NTRK fusion confirmed, does it match the current indication, and is entrectinib an accessible option for me?
Repotrectinib / Augtyro
A kinase inhibitor with activity against TRK and ROS1 signalling, including some resistance alterations.
See how this medicine works
Treatment pressure can sometimes select additional changes that alter how a previous inhibitor fits.
Repotrectinib was designed to inhibit several forms of TRK and ROS1 signalling.
A biological match does not automatically mean the medicine has a cholangiocarcinoma indication or funded access in Australia.
Australian context: current Australian registration should be checked against the exact cancer type and indication before treating an NTRK result as an available CCA therapy.
Ask: Does my exact NTRK result create a scientifically relevant repotrectinib option, and if so, through what approved, trial or access pathway?
Selpercatinib / Retevmo
A RET-targeted medicine that inhibits abnormal RET signalling.
See how this medicine works
That altered protein can keep sending growth signals.
Selpercatinib inhibits RET signalling.
Selpercatinib does not repair the RET fusion. It blocks the signalling the altered RET protein creates.
Australian context: a RET fusion does not by itself establish a registered or funded cholangiocarcinoma indication in Australia. The current access pathway must be checked.
Ask: Was a true RET fusion confirmed, does selpercatinib match the biology, and through what approved, trial or other access pathway could it be available to me?
ADDITIONAL IMMUNOTHERAPY
Other checkpoint-immunotherapy approaches
These treatments use different immune-checkpoint strategies from the established first-line Gem/Cis checkpoint combinations. Their relevance depends on the treatment setting, tumour biology, evidence, previous treatment and access.
Immune mechanism → Evidence → Treatment setting → Access.
Nivolumab / Opdivo
A checkpoint immunotherapy that binds PD-1 on immune T cells.
See how this medicine works
PD-L1 or PD-L2 can bind PD-1 and reduce T-cell activity.
Nivolumab binds PD-1 and blocks that checkpoint interaction.
Nivolumab does not directly damage the cancer cell. It blocks one immune-control pathway.
What makes it relevant to me? Nivolumab has been studied in biliary tract cancer, but it is not interchangeable with established first-line checkpoint combinations.
Ask: Why is nivolumab being considered in my case, what evidence supports that use, and through what access pathway would I receive it?
Ipilimumab / Yervoy
A checkpoint immunotherapy that blocks CTLA-4, a different immune-control receptor from PD-1.
See how this medicine works
CTLA-4 can reduce the activating signals a T cell receives.
Ipilimumab blocks CTLA-4, allowing stronger activation of some T cells.
Ipilimumab releases a different immune-control pathway from PD-1 medicines.
What makes it relevant to me? Its role in CCA depends on the treatment setting, evidence, combination being considered and access.
Ask: Why is CTLA-4 blockade being considered in my case, what would it add to the treatment strategy, and what additional toxicity does that create?
Nivolumab + Ipilimumab
Two checkpoint immunotherapies used together to block two different immune-control pathways.
See how this treatment works
Nivolumab blocks PD-1, helping prevent checkpoint signalling from suppressing T cells.
Ipilimumab blocks CTLA-4, allowing stronger T-cell activation.
Blocking two checkpoints can strengthen immune activation, but it can also increase immune-related toxicity.
What makes it relevant to me? MSI-H or dMMR can make checkpoint immunotherapy particularly important, but those biomarkers do not automatically establish that nivolumab + ipilimumab is the correct CCA regimen.
Ask: What specific evidence supports nivolumab + ipilimumab for my cancer, why use two checkpoints rather than one, and how does the added toxicity change the decision?
RAS-TARGETED TREATMENT
A treatment now approved in another cancer, with CCA relevance still being investigated
RAS-targeted treatment is changing quickly. A medicine can become approved in one cancer type while its role in cholangiocarcinoma remains investigational.
Drug approval does not automatically mean CCA approval or CCA access.
Daraxonrasib / RASONQUE / RMC-6236
A RAS-targeted medicine designed to inhibit active RAS proteins across several RAS mutations.
See how this medicine works
Normally, RAS cycles between active and inactive states.
Some RAS mutations can keep growth signalling abnormally active.
Daraxonrasib is designed to inhibit active RAS signalling.
Daraxonrasib does not repair the KRAS or other RAS mutation. It inhibits the signalling produced by active RAS.
What is its current status? Daraxonrasib is now an FDA-approved medicine for a defined metastatic pancreatic adenocarcinoma population in the United States.
What does that mean for CCA? That approval does not establish daraxonrasib as an approved or standard cholangiocarcinoma treatment. CCA relevance still depends on the exact RAS alteration, current research, clinical-trial eligibility and other access pathways.
Ask: What exact KRAS or RAS alteration is on my report, what evidence exists for that alteration in cholangiocarcinoma, and is there a current clinical trial or other legitimate access pathway for me?
BILE-MODIFYING MEDICINE
Medicines acting on bile rather than directly on the cancer
Some medicines can change bile composition or support bile handling in particular cholestatic conditions. That is a different job from killing cancer or physically relieving a malignant obstruction.
Ursodeoxycholic acid / UDCA / Urso
A bile acid used as a medicine for chronic cholestatic liver diseases.
See how this medicine works
Hepatocyte Cell Cities produce bile.
Bile then moves through tiny canaliculi and into cholangiocyte-lined bile ducts.
UDCA does not widen a narrowed duct.
Its job is to change part of the bile-acid mixture flowing through the system.
What is it? Ursodeoxycholic acid, usually shortened to UDCA, is itself a bile acid.
What does it change? UDCA changes the bile-acid composition and can support bile secretion in some cholestatic conditions.
UDCA changes the bile. It does not mechanically open an obstruction.
What does this mean if I have cholangiocarcinoma? UDCA is not chemotherapy, immunotherapy or targeted anticancer treatment. It does not directly kill or shrink cholangiocarcinoma.
When could it still matter? It may be relevant when a clinician identifies a cholestatic liver condition or another bile-related reason for using it.
What if the bile duct is physically blocked? A fixed malignant obstruction is a plumbing problem. Restoring drainage may require ERCP, stenting, percutaneous drainage, surgery or another appropriate intervention.
UDCA: changes the bile-acid environment in appropriate conditions.
Drainage or stenting: restores a physical route when bile cannot flow through the plumbing.
Ask: Is my bile-flow problem being caused by a physical obstruction, a cholestatic problem, or both?
Ask: What specific job would UDCA be expected to do in my situation?
If I am taking it, ask: What measure will tell us whether it is helping: symptoms, bilirubin, other liver blood tests, or another defined outcome?
Before starting, changing or stopping a treatment, understand the job it is meant to do.
Then ask whether the treatment still protects the most important opportunity: cure where possible, survival extension where cure is not currently possible, and the next treatment opportunity if the present treatment stops working.
Right Question: What is this treatment trying to achieve, why does it fit my cancer now, and what opportunity are we protecting next?
SECTION 08 | PROCEDURES & LOCAL TREATMENT
What local problem is this treatment trying to solve?
Local and locoregional treatments concentrate treatment on one tumour, one part of an organ, or one defined region of disease. The important question is not simply whether a procedure exists. It is what that procedure is trying to do, why the tumour is a suitable target, and what successful local control could make possible next.
Systemic treatment and local treatment solve different problems.
Systemic treatment travels through the body and can reach cancer in more than one location.
Local treatment concentrates its effect on a particular tumour or defined target.
Locoregional treatment acts within a wider region, often using the liver's blood supply as the treatment route.
Different procedures can destroy tumour tissue, damage its cells, reduce its blood supply, deliver chemotherapy or radiation through an artery, or mechanically disrupt it.
Target → Goal → Method → Anatomical fit → What becomes possible next.
- Identify exactly which tumour or region is being targeted.
- Know what local treatment needs to achieve.
- Understand what the procedure physically does to the tumour.
- Check whether tumour size, position, blood vessels, bile ducts, liver reserve and other anatomy make the procedure suitable.
- Ask what successful local control would make possible next.
- Local treatment does not automatically treat cancer elsewhere in the body.
- The same tumour may not be suitable for every local technique.
- Size matters, but position and nearby structures can matter just as much.
- A procedure can be useful because of what it controls now and what it may make possible next.
- Local-treatment decisions should be made with the wider treatment plan still visible.
Local therapy
Treatment concentrated on one tumour or one defined area of cancer.
See what this means for you
Picture it:
Systemic treatment
→ travels through the body.
Local treatment
→ concentrates treatment
on one tumour
or one defined location.
Local treatment can destroy tumour tissue using heat, cold, electrical energy, mechanical energy or another focused method.
Whether it makes sense depends on tumour size, tumour position, number of disease sites, nearby structures, liver reserve, treatment goal and specialist expertise.
Ask: Which tumour are we trying to control, what is the local treatment trying to achieve, and what would successful control make possible next?
Locoregional therapy
Treatment focused on a tumour and the organ or region where the cancer is located.
See what this means for you
Local
→ one defined target.
Locoregional
→ tumour plus
the organ
or region around it.
In liver-directed treatment, the hepatic arterial system can be used as a route to deliver treatment into the region containing the cancer.
Examples include TACE, SIRT / Y-90 and hepatic arterial infusion chemotherapy.
Ask: Is this treatment aimed at one tumour, several tumours within part of the liver, or a wider region of disease?
Ablation
Treatment that destroys tumour tissue where it sits rather than removing it with surgery.
See what this means for you
Think of ablation as destroying the tumour in place.
Tumour identified → treatment focused into or around the tumour → physical energy damages tumour tissue → treated cells die → the body gradually processes the damaged tissue.
The technique matters because tumour size, tumour position, nearby blood vessels, bile ducts and other organs can affect which method is suitable.
Radiofrequency ablation and microwave ablation are recognised options for selected small intrahepatic tumours when surgery is not suitable.
Ask: Can my tumour be completely treated with ablation, which form is being considered, and what makes that method suitable for its size and position?
Radiofrequency ablation (RFA)
A probe is placed into the tumour and uses electrical energy to create heat that destroys tumour tissue.
See how it works
Imaging identifies tumour → probe enters target → electrical current produces heat → temperature rises → treated tumour tissue is destroyed.
Australian optimal-care guidance identifies RFA as a treatment that may be considered for selected intrahepatic biliary cancers no greater than 3 cm when surgery is contraindicated.
Tumour size is only part of the decision. Position, nearby blood vessels, bile ducts and other organs can also affect whether complete treatment can be achieved safely.
Ask: Is my tumour small enough and positioned so that RFA can safely treat the whole target?
Microwave ablation
A probe is placed into the tumour and uses microwave energy to heat and destroy tumour tissue.
See how it works
Imaging identifies tumour → probe enters target → microwave energy agitates water molecules → temperature rises rapidly → treated tumour tissue is destroyed.
Australian optimal-care guidance identifies microwave ablation as a treatment that may be considered for selected intrahepatic biliary cancers no greater than 3 cm when surgery is contraindicated.
Ask: Why is microwave ablation being considered rather than RFA or another local treatment for my tumour?
Cryoablation
A probe is placed into the tumour and makes the tissue extremely cold, freezing and destroying tumour cells.
See how it works
Probe enters tumour → tissue freezes → ice forms within and around cells → cell structures are damaged → treated tumour tissue dies.
Cryoablation is not one of the specific thermal-ablation techniques highlighted in the Australian optimal-care pathway for biliary tract cancer.
Its role therefore depends more heavily on tumour anatomy, specialist expertise, available evidence and the wider treatment plan.
Ask: Why is cryoablation being considered for my tumour, and what advantage would freezing provide over a more established local option?
NanoKnife / Irreversible Electroporation (IRE)
Needles are positioned around the tumour and deliver short electrical pulses that permanently disrupt tumour-cell membranes.
See how it works
Picture the outer membrane of each cancer Cell City.
Needles positioned around tumour → electrical pulses pass between them → permanent microscopic openings form in cell membranes → cells lose control of their internal environment → treated tumour cells die.
Because its main effect is not produced by heat, IRE may be considered in selected situations where important blood vessels, bile ducts or other structures are close to the tumour.
IRE is not specifically identified as a standard biliary tract cancer locoregional treatment in the Australian optimal-care pathway.
Its use therefore requires an individual assessment of anatomy, evidence, specialist experience and treatment purpose.
Ask: What feature of my tumour's location makes IRE worth considering, and what would successful local control make possible next?
TACE
A catheter is guided into an artery supplying the tumour, chemotherapy is delivered locally, and arterial blood flow is then reduced.
See how it works
Picture the tumour receiving blood through an arterial supply line.
Catheter enters artery → catheter reaches a tumour-feeding branch → chemotherapy is delivered locally → embolic material reduces arterial flow → treatment remains concentrated around the target.
TACE uses the tumour's arterial blood supply as both a treatment route and a target.
Australian optimal-care guidance recognises chemoembolisation as one of the intra-arterial locoregional approaches that may be considered for selected patients under multidisciplinary guidance.
Its usefulness depends on which tumours are being supplied by the artery, liver reserve, disease elsewhere, anatomy, treatment goal and the wider systemic plan.
Ask: Which tumour-feeding artery will be treated, what are we trying to achieve, and what would successful local control make possible next?
Y-90 / SIRT / Radioembolisation
A catheter delivers microscopic radioactive particles into arteries supplying tumour tissue in the liver, placing radiation close to the cancer from inside the body.
See how it works
Picture the liver's arterial system being used as a delivery route for radiation.
Catheter enters artery → catheter reaches the liver tumour supply → tiny Y-90 particles are released → particles lodge in small vessels around tumour tissue → radiation acts locally.
Y-90 delivers radiation from inside the tumour's arterial territory.
This is why the treatment is called selective internal radiation therapy, or SIRT.
Australian optimal-care guidance recognises SIRT as a locoregional option that may be considered in selected patients, including alongside systemic treatment, under multidisciplinary guidance.
Ask: Which part of my liver is being targeted, what is Y-90 trying to achieve, and why is it preferred over another local treatment in my case?
Hepatic Arterial Infusion Chemotherapy (HAIC)
Chemotherapy delivered directly into the hepatic artery so treatment is concentrated within the liver.
See how it works
Picture the hepatic artery as a treatment route into the liver.
Catheter or infusion system accesses hepatic artery → chemotherapy enters arterial blood supplying the liver → high local treatment concentration reaches liver tumours.
HAIC is chemotherapy. What changes is the delivery route: treatment is directed into the liver rather than given only as ordinary whole-body intravenous chemotherapy.
Australian optimal-care guidance recognises HAIC alongside other intra-arterial locoregional approaches that may be considered under multidisciplinary guidance.
The decision still depends on disease distribution, liver function, anatomy, previous treatment, systemic disease and treatment purpose.
Ask: Why is HAIC being considered for me, which liver disease is it intended to control, and how does it fit with my systemic treatment plan?
Histotripsy
A non-invasive local treatment that focuses ultrasound energy from outside the body to mechanically break apart targeted tumour tissue.
See how it works
Picture multiple ultrasound pulses being focused onto one precise target inside the tumour.
Ultrasound energy focused from outside body → pressure concentrates inside tumour → microscopic bubble cloud forms → bubbles rapidly expand and collapse → targeted tumour tissue is mechanically disrupted.
Histotripsy breaks apart targeted tissue without inserting an ablation probe into the tumour for the tissue destruction itself.
Histotripsy is not one of the established biliary tract cancer locoregional treatments identified in the Australian optimal-care pathway.
Its relevance therefore depends on tumour location, technical accessibility, specialist experience, evidence, treatment purpose and access.
Ask: Is my tumour technically accessible to histotripsy, what evidence supports using it in my situation, and what would successful local treatment make possible next?
What about SBRT, CyberKnife and Proton Therapy?
These are radiation treatments or radiation-delivery approaches. They belong in the dedicated Radiation Therapy section so each term has one canonical explanation.
The same local-treatment question still applies: what tumour is being targeted, what radiation is trying to achieve, and what successful local control could make possible next?
A technically possible procedure is not automatically the right procedure.
Local treatment should be understood in the context of the whole cancer, the treatment goal, anatomy, systemic treatment, surgical opportunity and what may still be possible afterwards.
Right Question: What exactly are we targeting, what is this procedure trying to achieve, and what opportunity are we trying to create or protect next?
RADIATION THERAPY
What is the radiation trying to achieve?
Radiation treatment directs energy into a defined tumour or treatment area. The important questions are what is being targeted, why radiation is being used, how the dose will be delivered, what nearby healthy structures must be protected, and what successful local control could make possible next.
Think of radiation as damaging the cancer Cell City's genetic instructions.
Inside City Hall, chromosomes are the Volumes of City Plans. Those volumes are made of DNA.
Radiation deposits energy into tissue and can damage that DNA.
If a cancer cell cannot successfully repair enough of that damage, it may stop dividing or die.
Target → Goal → Dose → Delivery → Protect what comes next.
- Identify exactly what tumour or treatment area is being targeted.
- Know what radiation is trying to achieve.
- Understand the total dose and how it is divided across treatment sessions.
- Understand how the radiation will reach the target and which nearby structures constrain the plan.
- Ask what successful local control could make possible next.
- Radiation is local treatment. It treats a defined target or treatment area.
- The total dose and the number of fractions both matter.
- Nearby bowel, liver, stomach, bile ducts and other structures can limit how radiation is delivered.
- SBRT, CyberKnife, proton therapy and brachytherapy describe different ways of delivering radiation.
- Radiation should remain connected to the wider treatment plan, including surgery, systemic treatment and transplant opportunity where relevant.
Radiation therapy
Treatment that directs high-energy radiation into a defined tumour or treatment area to damage cancer cells.
See what this means for you
Picture the chromosomes inside City Hall as Volumes of City Plans made from DNA.
Radiation reaches treatment area → energy is deposited in tissue → DNA is damaged → cancer cell attempts repair → enough unrepaired damage can stop division or lead to cell death.
Radiation is not one single technique.
It includes conventional external-beam radiation, stereotactic radiation, proton therapy and brachytherapy.
Australian consensus recognises radiation as a possible treatment in selected biliary tract cancer settings, including locally advanced disease, unresectable intrahepatic disease and some local recurrences.
Ask: What exactly are we targeting, what is radiation trying to achieve, and what would successful treatment make possible next?
External Beam Radiation Therapy (EBRT)
Radiation delivered from a machine outside the body and aimed into a planned tumour or treatment area.
See how it works
Picture radiation being aimed from outside the body toward a three-dimensional target inside it.
Tumour mapped on imaging → radiation plan designed → beams enter body from selected directions → planned dose concentrates in target → nearby organs are kept within planned dose limits.
Australian consensus says EBRT can be considered for unresectable intrahepatic cholangiocarcinoma.
EBRT or chemoradiotherapy may also be considered as definitive treatment for selected locally advanced cholangiocarcinoma.
Ask: What area is included in my radiation field, what dose is planned, and which nearby organs limit that dose?
Photon radiation
External-beam radiation that uses high-energy X-rays, also called photons, to deliver treatment through the body to a tumour.
See how it works
Think of a photon as a packet of electromagnetic energy.
Medical treatment machines produce high-energy X-ray photons and direct them toward the tumour.
Photon beam enters body → deposits energy on the way in → passes through tumour → damages tumour-cell DNA → some radiation continues beyond target.
Ask: What healthy organs are close to my tumour, and how is the photon plan protecting them?
Gray (Gy)
Gray, shortened to Gy, is the unit used to describe how much radiation energy is absorbed by tissue.
See what the number means
Think of Gy as the measurement attached to the radiation dose.
One Gray means one joule of radiation energy has been absorbed per kilogram of tissue.
You do not need to calculate that yourself.
Gy tells you how much radiation dose the treatment plan is prescribing.
A higher Gy number does not automatically mean a better or stronger treatment.
The useful and safe dose depends on the tumour, treatment goal, number of fractions and healthy organs nearby.
Ask: What total dose am I receiving in Gy, and why is that dose appropriate for this tumour and treatment goal?
Fractionation
Fractionation describes how the total radiation dose is divided across separate treatment sessions.
See what a fraction means
One radiation dose delivered at one treatment session is called a fraction.
Total planned radiation dose → divided into smaller doses → each dose is one fraction → fractions delivered over the planned schedule.
Fraction
= one treatment dose.
Fractionation
= the plan
for how all those doses
are divided.
Hypofractionation usually means fewer treatment sessions with a larger dose in each fraction.
Hyperfractionation means the total treatment is divided into more frequent, generally smaller fractions.
These words do not tell you whether a treatment is better or worse. They describe how the dose is scheduled.
Ask: How many fractions am I receiving, how much radiation is delivered in each fraction, and why was this schedule chosen?
Chemoradiotherapy / Chemoradiation
Radiation therapy given during the same treatment period as chemotherapy.
See why the treatments are combined
Think of two treatments putting pressure on the same cancer in different ways.
Chemotherapy given → cancer cells may become more vulnerable to radiation → radiation damages DNA in treatment area → combined treatment increases local treatment pressure.
Australian consensus says chemoradiotherapy may be considered as definitive treatment for selected inoperable locally advanced cholangiocarcinoma.
It may also be considered following resection of margin-positive or node-positive intrahepatic cholangiocarcinoma.
For selected unresectable perihilar cholangiocarcinoma where liver transplantation is not an option, concurrent chemoradiation, with or without intraluminal brachytherapy, may be considered after an initial period of treatment.
Ask: Why are chemotherapy and radiation being combined in my case, and what advantage are we trying to gain compared with either treatment alone?
SBRT / SABR
Highly focused radiation that delivers a concentrated treatment dose to a defined tumour over a small number of fractions.
See how it works
Picture several precisely aimed radiation paths meeting at one tumour.
Tumour mapped → movement and nearby organs measured → radiation paths planned from several directions → dose converges at target → concentrated treatment delivered over fewer fractions.
SBRT is not automatically suitable simply because a tumour can be seen.
Australian consensus specifically warns that strict organ dose limits are important when the target is on or near bowel or another luminal structure.
In selected unresectable perihilar disease, dose-reduced SBRT may be considered where chemotherapy is contraindicated.
Ask: Is my tumour safely positioned for SBRT, how many fractions are planned, which nearby organs limit the dose, and what result are we aiming for?
CyberKnife
A robotic radiation-delivery system used to deliver highly focused stereotactic radiation from many different angles.
See what the name really means
Despite the name, there is no knife.
CyberKnife is a radiation machine mounted on a robotic arm.
Tumour mapped → robotic arm moves around patient → radiation delivered from many directions → treatment beams concentrate at tumour.
CyberKnife is a way of delivering stereotactic radiation. It is not surgery.
Ask: Is CyberKnife being recommended because it offers a technical advantage for the location or movement of my tumour, or could another SBRT system achieve the same goal?
Proton therapy
Radiation treatment that uses beams of positively charged particles called protons to deliver radiation to a tumour.
See how it works
Picture an atom.
At its centre is a nucleus. Inside that nucleus are particles called protons and neutrons.
Proton therapy takes protons, accelerates them to very high speed and forms them into a treatment beam.
Protons accelerated → beam enters body → protons travel toward planned depth → much of treatment energy released around target → less radiation continues beyond tumour.
Conventional photon radiation continues depositing some energy as it passes beyond the target.
Proton therapy can reduce that exit dose.
That does not automatically make proton therapy better for every tumour.
Its value depends on tumour position, depth, surrounding anatomy and whether reducing radiation to nearby healthy tissue creates a meaningful treatment advantage.
Ask: What specific healthy organ or tissue would proton therapy protect better in my case, and would that difference meaningfully change treatment safety or effectiveness?
Brachytherapy
Radiation delivered from a source placed inside or very close to the area being treated.
See how it works
Picture bringing the radiation source close to the inside of the bile duct rather than aiming all treatment from outside.
Treatment catheter positioned → radiation source placed near target → radiation delivered over short distance → surrounding tumour receives concentrated dose.
Australian consensus says concurrent chemoradiation with or without intraluminal brachytherapy may be considered in selected unresectable perihilar cholangiocarcinoma when liver transplantation is not an option.
Ask: Why is intraluminal brachytherapy being considered, what part of the bile duct are we trying to treat, and what additional benefit is expected beyond external radiation?
If liver transplantation may still be an option, radiation planning becomes part of the transplant strategy.
The Australian Controversies group says that where neoadjuvant radiation is being considered before transplantation, it should be planned in consultation with, and usually delivered through, an experienced transplant-linked unit.
The same source notes that the role of radiotherapy around transplantation remains an active area of study.
Right Question: Has the transplant team been directly involved before this radiation plan is finalised?
Radiation is not just a dose aimed at a tumour.
The treatment plan should make clear what is being targeted, what radiation is expected to achieve, how much dose will be delivered, how that dose will be divided, what nearby structures constrain treatment, and what opportunity successful local control is intended to create or protect.
Right Question: What exactly are we targeting, what is this radiation trying to achieve, and what opportunity are we trying to create or protect next?
IMMUNOTHERAPY & IMMUNE CHECKPOINTS
Release the right immune brake.
Checkpoint immunotherapy does not simply boost the immune system. It blocks a specific braking pathway. For that to help, immune cells still need to recognise the cancer, become activated, reach it, remain functional and continue their attack.
Picture the immune system as security moving through the Cell City.
A T cell can inspect molecular signs displayed by cells and recognise that something may be infected, damaged or biologically unusual.
Recognition alone is not enough.
The T cell also needs the right activating signals, must reach the cancer, and must remain functional long enough to attack it.
T cells also carry normal biological brakes. These brakes help prevent uncontrolled immune attack against healthy tissue.
Cancer can survive while those brake systems are operating. Checkpoint medicines block selected braking pathways.
Releasing the brake is therefore only one part of the job.
Recognise → Activate → Release the brake → Check response → Protect what comes next.
- Understand what may make the cancer visible to the immune system.
- Know which checkpoint is being targeted and what that checkpoint normally does.
- Understand why checkpoint treatment fits your treatment setting.
- Know how benefit will be measured and which new symptoms need prompt reporting.
- Before treatment starts, protect any remaining curative, surgical or transplant opportunity.
- Checkpoint immunotherapy releases specific immune brakes.
- The immune system still has to recognise the cancer.
- T-cell activation needs more than recognition alone.
- PD-1, PD-L1 and CTLA-4 are different parts of immune control.
- Releasing a checkpoint does not guarantee response, and new symptoms during treatment can require prompt medical attention.
Where checkpoint treatment sits in Australian biliary cancer care
Australian consensus work supports cisplatin plus gemcitabine with a checkpoint inhibitor as a first-line systemic treatment for selected patients with advanced biliary tract cancer that cannot currently be completely removed by surgery.
Treatment suitability still depends on the person's condition, liver function, disease setting and the wider treatment plan.
Doctors often describe day-to-day physical function using ECOG performance status. ECOG 0 means fully active. ECOG 1 means able to carry out normal light activity but limited in strenuous activity.
ECOG is not a cancer stage. It describes how well a person is functioning at that point in time.
The Australian consensus work informs treatment decisions but does not replace individual multidisciplinary assessment.
Immunotherapy
Treatment that changes how the immune system responds to cancer.
See what this means for you
Think of immunotherapy as changing the relationship between the immune system and the cancer.
Checkpoint immunotherapy does not directly kill cancer cells in the same way chemotherapy is designed to.
Instead, it changes immune control so an existing immune response may remain active against the cancer.
Cancer displays something recognisable → T cell recognises it → T cell becomes activated → checkpoint brake reduces activity → checkpoint medicine blocks that brake → immune attack may continue → cancer may be controlled.
Immunotherapy can release a brake. It cannot create every missing part of an immune response.
Protect the next opportunity
before treatment starts.
If liver transplantation
could still be a treatment option,
checkpoint immunotherapy
should be discussed
with the transplant team
before the first dose.
Australian expert work
identifies important concerns
about checkpoint treatment
before transplantation,
including transplant rejection.
Ask: Which immunotherapy am I receiving, which checkpoint does it target, why does it fit my treatment setting, and could starting it affect any curative or transplant opportunity I may still have?
T cell
A type of immune cell that can recognise and attack cells carrying signs that something is wrong.
See what a T cell is doing
Picture a T cell as a mobile security unit.
It does not attack every cell.
Instead, it inspects small molecular samples displayed by cells for evidence that something may be infected, damaged or abnormal.
Proteins can be broken into small pieces called peptides.
These peptide samples are displayed by molecules called MHC for T cells to inspect.
An antigen is something the immune system can specifically recognise.
Protein is broken into peptide pieces → peptide is displayed by MHC → T cell inspects it → recognition may occur → activating and braking signals are weighed → immune action may follow.
Recognition tells the T cell what it is seeing. Other signals help determine whether it should act.
Ask: What is expected to make my cancer visible to T cells?
Tumour antigen / Neoantigen
A tumour antigen is a molecular sign the immune system may recognise on a cancer cell. A neoantigen is a new tumour-specific antigen created by a cancer-related change.
See how recognition begins
Picture each Cell City displaying small samples of what is being made inside it.
Inside City Hall, chromosomes are the Volumes of City Plans. Those volumes are made of DNA.
Genes are Chapters of City Instructions within those volumes.
If a DNA alteration changes one of those instructions, the resulting protein can also change.
Proteins can then be broken into small peptide fragments and displayed for immune inspection.
If an altered protein creates a new fragment the immune system has not previously recognised, that fragment may act as a neoantigen.
DNA alteration survives → gene instruction changes → altered protein is produced → peptide fragment is displayed → T cell may recognise something unusual → immune attack becomes possible.
Not every mutation creates a useful neoantigen. And not every neoantigen produces an effective immune response.
Cancers with large numbers of DNA copying errors can sometimes produce more abnormal protein fragments.
This helps explain why MSI-H, dMMR and high TMB can be relevant to immunotherapy.
Ask: Is there anything in my tumour biology suggesting the cancer may be particularly visible to the immune system?
Antigen-presenting cell (APC)
An immune cell that displays peptide samples to T cells and helps activate the appropriate T-cell response.
See what an APC does
Think of an APC as the immune system's briefing officer.
The APC collects material from around it or from cells it has encountered.
Proteins in that material are broken into small pieces called peptides.
The APC displays selected peptides on its surface.
A molecule called MHC holds each peptide up for inspection.
Peptide
= the protein piece
being displayed.
MHC
= the holder
displaying that piece.
APC
= the immune cell
doing the displaying.
A T cell can inspect the peptide being held by MHC.
But recognising the peptide is usually not enough to fully activate a naive T cell.
The APC can also provide another activating signal through molecules called B7.
B7 can connect with a receptor called CD28 on the T cell.
APC collects material → protein is broken into peptides → MHC displays peptide → T cell recognises it → B7 can connect with CD28 → activation signal strengthens → T cell may become fully activated.
The displayed peptide
helps tell the T cell
what it is seeing.
Additional signals
help tell the T cell
whether to act.
Important APCs include dendritic cells, macrophages and B cells.
Ask: Is the immune system only recognising the cancer, or is it also receiving the signals needed to activate an effective T-cell response?
CD28
An activating receptor on a T cell that helps provide the additional signal needed for strong activation.
See how CD28 helps switch on a T cell
Think of CD28 as a go receiver on the T cell.
A receptor is a protein that receives a signal from another molecule.
Before CD28 becomes important, the T cell has already inspected a peptide being displayed by an antigen-presenting cell.
Recognition is usually only the first signal.
The APC also carries signalling molecules called B7.
When B7 connects with CD28, the T cell receives an additional activating signal.
APC displays peptide → T cell recognises it → B7 connects with CD28 → additional go signal enters the T cell → activation strengthens.
This additional activating signal is called co-stimulation.
Recognition
tells the T cell
what it sees.
CD28 helps tell it
to activate.
CD28 matters to the CTLA-4 pathway because CTLA-4 can also interact with B7 molecules.
CD28
helps strengthen activation.
CTLA-4
helps restrain activation.
Ask: What additional signal does the T cell need after recognising the antigen, and how does CD28 help provide it?
B7 (CD80 / CD86)
Signalling molecules on an antigen-presenting cell that can connect with CD28 or CTLA-4 on a T cell.
See how B7 connects go and slow
Think of B7 as the signalling partner displayed by the APC.
B7 is a family name. The two molecules most important here are CD80 and CD86.
B7 can connect with two different receptors on the T cell: CD28 and CTLA-4.
B7 connects with CD28
→ activating signal strengthens.
B7 connects with CTLA-4
→ braking influence increases.
APC
= the cell
presenting the signal.
B7
= the signalling partner
on the APC.
CD28
= the activating receptor
on the T cell.
CTLA-4
= the braking receptor
on the T cell.
The biology is more complex than two simple switches, but this is the useful patient picture.
Ask: Is B7 interacting with CD28 to strengthen activation, or with CTLA-4 to increase braking?
Immune checkpoint
A normal biological control system that can reduce or restrain immune-cell activity.
See why the brake exists
Think of a checkpoint as a normal brake, not something invented by the cancer.
Immune attack can damage healthy tissue if it continues without control.
The body therefore uses biological control systems to restrain activated immune cells.
PD-1 and CTLA-4 are two important checkpoint systems.
The checkpoint is normal. Checkpoint treatment changes how strongly that brake can operate.
Ask: Which checkpoint is my treatment blocking: PD-1, PD-L1, CTLA-4 or another pathway?
PD-1
A checkpoint receptor on immune cells, including T cells, that can receive a signal telling the immune cell to slow down.
See the PD-1 brake
Picture PD-1 as a brake receiver on the T cell.
The technical word for a receiving protein is a receptor.
PD-1 has two known binding partners: PD-L1 and PD-L2.
A molecule that binds to a receptor is called a ligand.
PD-L1 or PD-L2 connects with PD-1 → braking signal enters the T cell → T-cell activity falls → immune attack may weaken.
Pembrolizumab and nivolumab bind PD-1 and interfere with this braking pathway.
Receptor
= the receiver.
Ligand
= the molecule
that binds to it.
PD-1
= the brake receiver.
PD-L1 and PD-L2
= ligands
that can engage it.
Ask: Is my medicine blocking PD-1, and what are we trying to achieve by releasing that brake?
PD-L1
PD-L1 is a ligand that can connect with PD-1 and send a braking signal to a T cell.
See the connection
Think of PD-L1 as one of the molecules that can engage the PD-1 brake.
PD-L1 on a tumour or nearby cell → connects with PD-1 on a T cell → braking signal is sent → immune activity may decrease.
PD-L1 is the ligand. PD-1 is the receptor.
Durvalumab blocks PD-L1.
PD-L1 can also be measured on pathology testing, but its meaning depends on the cancer and treatment setting.
A low or negative PD-L1 result does not automatically mean checkpoint immunotherapy has no role.
In established first-line checkpoint combinations used in advanced biliary tract cancer, a positive PD-L1 result is not required simply to consider the regimen.
CTLA-4
An immune checkpoint receptor that helps limit how strongly T cells become activated.
See the CTLA-4 brake
Picture a T cell receiving both a go signal and a brake signal.
First, the T cell recognises a peptide being displayed by an antigen-presenting cell.
Recognition alone is usually not enough to fully activate a naive T cell.
CD28 is an activating receptor on the T cell.
B7 molecules on the antigen-presenting cell can connect with CD28 and strengthen activation.
CTLA-4 is another receptor on the T cell.
It can also interact with B7, but its effect is to increase braking pressure on T-cell activation.
APC displays peptide → T cell recognises it → B7 can connect with CD28 → activation strengthens → CTLA-4 can also engage B7 → braking influence increases → T-cell activation is restrained.
CD28
helps strengthen activation.
CTLA-4
helps restrain activation.
Both interact
with B7.
Ipilimumab blocks CTLA-4.
Reducing that braking influence can allow stronger T-cell activation.
The underlying biology is more complex than two simple switches, but this model preserves the central patient-level distinction: CD28 supports activation, while CTLA-4 helps limit it.
Ask: Why is CTLA-4 being targeted in my case, and what is it expected to add beyond PD-1 treatment alone?
Checkpoint inhibitor
A medicine that blocks a specific immune checkpoint so that checkpoint cannot apply the same braking signal.
See what brake each medicine releases
Start with the brake, not the drug name.
Pembrolizumab
→ blocks PD-1.
Nivolumab
→ blocks PD-1.
Durvalumab
→ blocks PD-L1.
Ipilimumab
→ blocks CTLA-4.
Checkpoint inhibition is not generic immune stimulation. It is targeted interference with a specific immune brake.
Blocking one checkpoint does not remove every barrier between a T cell and the cancer.
The cancer may still be difficult to recognise, difficult to enter, biologically suppressive, or surrounded by T cells that have become exhausted.
Ask: Which checkpoint does my medicine block, why is that checkpoint relevant in my treatment setting, and what still has to be true for releasing that brake to help control my cancer?
Tumour microenvironment
The local biological environment around and within a tumour, including immune cells, blood vessels, connective tissue, nutrients and chemical signals.
See what surrounds the cancer
Picture the tumour as a neighbourhood, not just a ball of cancer cells.
Cancer cells live among immune cells, blood vessels, support cells, connective tissue, signalling molecules, nutrients and metabolic waste.
Together, these conditions form the tumour microenvironment.
In cholangiocarcinoma, this environment can contain particularly dense fibrous support tissue.
The medical term for this is desmoplastic stroma.
The local environment can also become difficult for immune cells to work in.
Low oxygen, altered nutrient use, acidity and suppressive signalling can all reduce effective immune function.
Cancer continues growing → surrounding tissue and signalling change → immune cells encounter physical, chemical and metabolic barriers → T-cell function weakens → cancer survives → suppressive conditions continue.
Releasing one checkpoint brake does not remove every barrier inside the tumour microenvironment.
Ask: If checkpoint treatment is not controlling my cancer, could the problem involve more than the checkpoint itself, such as immune exclusion, suppressive tumour conditions or poor T-cell function?
Desmoplastic stroma
Dense, fibrous support tissue that can build up around and within a tumour.
See what desmoplastic stroma is
Think of desmoplastic stroma as dense scaffolding built around the cancer.
A tumour is not made only of cancer cells.
It also contains support cells, blood vessels, connective tissue and other material surrounding those cells.
This supporting tissue is called stroma.
When the stroma becomes unusually dense and fibrous, it is called desmoplastic stroma.
Stroma
= support tissue
around the cancer.
Desmoplastic
= unusually dense
and fibrous.
Tumour develops → surrounding support tissue changes → dense stroma builds → movement and signalling inside the tumour change → immune cells and treatments may face a more difficult environment.
T cells may sometimes remain around a tumour but have difficulty entering the areas containing cancer cells.
This can contribute to what is called immune exclusion.
Immune exclusion = immune cells are present, but are having difficulty reaching the cancer cells they need to attack.
Dense stroma can also affect blood flow, chemical signalling and movement of medicines through the tumour.
It is not a simple wall, and it is not the only reason treatment may fail.
Ask: Could dense tumour stroma or immune exclusion be making it harder for T cells or treatment to reach my cancer effectively?
Immune exhaustion
A state in which T cells exposed to prolonged stimulation gradually lose some of their ability to work effectively.
See what immune exhaustion means
Think of a T cell being kept on the same emergency for too long.
Cancer can keep presenting recognised targets to the immune system over a long period.
That prolonged stimulation can gradually change how the T cell works.
An exhausted T cell may produce fewer attack signals, kill less effectively, and respond less strongly than it did before.
Exhausted T cells can also express more inhibitory control proteins.
PD-1 is one of those control proteins, but immune exhaustion is broader than PD-1 alone.
Cancer keeps presenting antigen → T cell keeps responding → prolonged stimulation changes the T cell → attack signals weaken → killing becomes less effective → cancer survives → stimulation continues.
PD-1
= one immune brake.
Immune exhaustion
= a broader loss
of T-cell function
after prolonged stimulation.
Blocking PD-1 can sometimes restore useful T-cell activity.
But removing one brake may not fully restore a T cell that has become deeply exhausted.
Ask: If checkpoint treatment is not working, could the T cells be too exhausted or suppressed to respond effectively even after the brake is released?
Immunotherapy response
Evidence that immunotherapy is helping control the cancer.
See what has to happen for immunotherapy to work
Releasing an immune brake is only one step.
Cancer displays something recognisable → T cell recognises it → T cell becomes activated → T cell reaches the cancer → T cell remains functional → checkpoint brake is released → immune attack continues → cancer may be controlled.
Recognition
= the T cell
can see the target.
Access
= the T cell
can reach the cancer.
Function
= the T cell
can still act.
Checkpoint release
= one brake is removed.
Response
= the cancer
is actually being controlled.
Cancer control may appear in different ways.
Tumours may shrink, remain stable, or stay controlled for a meaningful period without growing.
Response is usually assessed using scans, measurable tumour change, symptoms, overall condition, and how those findings change over time.
Immunotherapy response is not defined by receiving the medicine. It is defined by evidence that the cancer is being controlled.
Occasionally, immunotherapy can produce unusual early scan patterns.
One of these is called pseudoprogression.
But an enlarging tumour should not automatically be assumed to be pseudoprogression.
Ask: What will count as a response in my case, when will it be assessed, and what evidence would make us continue, change or stop treatment?
Immunotherapy resistance
When immunotherapy does not control the cancer, or stops controlling it after an earlier response.
See how resistance can happen
Think of resistance as the cancer finding another way to survive.
There are two broad patterns.
Primary resistance means immunotherapy never produces useful cancer control.
Acquired resistance means the cancer is controlled for a period and then begins growing again.
Primary resistance
= it never worked
well enough.
Acquired resistance
= it worked first,
then the cancer escaped.
Primary resistance can occur if one or more essential steps in the immune response are missing.
Cancer is not recognised well → T cells are not activated strongly → T cells cannot reach the cancer → T cells are exhausted or suppressed → the checkpoint being blocked is not the main barrier → useful cancer control does not develop.
Acquired resistance can develop because cancer cells are not all identical.
Treatment may control cancer cells that are easier for the immune system to attack, while harder-to-attack cells survive.
Cancer population varies → immune treatment controls more vulnerable cells → harder-to-attack cells survive → surviving population becomes more dominant → cancer begins growing again.
Cancer cells can also change how they are seen by the immune system.
They may lose a recognised antigen or alter the machinery used to display peptide fragments to T cells.
Antigen loss
= the immune system
loses a target
it was recognising.
Altered antigen presentation
= the target
may still exist,
but is no longer
displayed effectively
for T cells
to inspect.
Resistance can also involve other immune brakes, immune exhaustion, dense tumour stroma, or other changes in the tumour microenvironment.
Releasing one immune brake does not guarantee every other barrier has been removed.
Ask: Is this primary or acquired resistance, what may have changed biologically, and does that create another treatment or clinical-trial opportunity?
Immune-related adverse event (irAE)
Inflammation or organ injury caused when checkpoint treatment allows immune activity to affect healthy tissue.
See why immune side effects are different
Checkpoint treatment changes immune control, not just the cancer.
The aim is to help immune cells continue attacking the cancer.
But the same change can sometimes allow immune activity to affect healthy tissue.
Checkpoint brake reduced → immune activity changes → immune cells may attack cancer → healthy tissue may also be affected → inflammation or organ injury may develop.
Bowel
→ diarrhoea
or colitis.
Lungs
→ pneumonitis.
Liver
→ hepatitis.
Skin
→ rash
or inflammation.
Thyroid
or other hormone glands
→ changes
in hormone production.
Kidneys,
nerves,
muscles,
heart
and other organs
can also be affected.
Immune-related adverse events can begin during treatment, after several treatment cycles, or sometimes after checkpoint treatment has stopped.
A new symptom does not automatically mean an immune-related adverse event.
Other causes are possible.
Important:
A new,
worsening
or unexplained symptom
while receiving
checkpoint immunotherapy
should be reported promptly
to the treating team.
Do not wait
for the next routine appointment
if you are becoming unwell.
New symptom → report it → let the treatment team decide whether it could be immune-related.
Ask before treatment starts: Which symptoms should make me contact the treatment team immediately, who do I contact after hours, and what should I tell another doctor or emergency department about my checkpoint treatment?
Biomarkers answer different immune questions.
MSI-H, dMMR, TMB and PD-L1 describe different parts of tumour biology or immune signalling.
They are not interchangeable tests.
Some biomarker results can strengthen the case for checkpoint treatment in particular settings.
But a low or negative result on one marker does not automatically close every immunotherapy option.
In advanced biliary tract cancer, checkpoint treatment may also be used as part of an established first-line combination without requiring a positive PD-L1 result.
Right Question: Which immune biomarkers were actually tested, what did each result mean, and does any result change my treatment options now?
Receiving immunotherapy is not the goal. Useful cancer control is.
The treatment plan should make clear what immune pathway is being targeted, why that approach fits the cancer, how response will be measured, what toxicity must be watched for, and what treatment opportunity should still be protected.
Right Question: What has to be true for this immunotherapy to help me, how will we know whether it is working, and what opportunity are we protecting next?
Clinical trial
A treatment option being formally studied in people.
See what a clinical trial really is
Think of a clinical trial as treatment with a research question attached.
You are receiving a real treatment or treatment strategy, but the researchers are also trying to answer a defined question.
That question might be:
Is this treatment safe?
What dose should be used?
Does it control the cancer?
Which patients benefit most?
Is it better than another treatment?
A trial may study:
a new medicine,
a new combination,
a new dose,
a new way of delivering treatment,
or an existing treatment
being used in a different group of patients.
The treatment may already have evidence behind it. But something about its use is still being formally tested.
Treatment idea → clinical trial designed → patients enter under trial rules → treatment is given → safety and outcomes are measured → evidence is collected.
Trial = treatment opportunity + research question + entry rules + structured monitoring.
Important: A clinical trial is not automatically better than established treatment. Benefit is never guaranteed, and there may be additional uncertainty.
The important patient question is not simply: “Is there a trial?”
It is: “Why might this particular trial be relevant to my cancer, and what opportunity could it create?”
Ask: What is the main question this trial is trying to answer, why might the treatment be relevant to my cancer, and what would I receive if I entered?
Think of a clinical trial as a treatment doorway with entry rules.
Finding the doorway does not mean you can automatically walk through it.
The trial has rules about who can enter. Those rules can depend on your cancer, tumour biology, previous treatments, organ function, general health and sometimes the exact timing of your application.
This is why timing matters.
A trial that fits you today may no longer fit after another treatment, a change in the cancer, or a change in your health.
You do not need to enter a trial today to identify which trials may matter tomorrow.
- Understand your cancer and tumour biology.
- Search for trials before you urgently need one.
- Ask the trial team to assess your eligibility.
- Before starting the next treatment, ask whether it could close a trial opportunity.
- Understand the practical pathway: treatment, travel, costs and access.
- A clinical trial can be a treatment option.
- Find the trial before you need the trial.
- Eligibility can change.
- The trial team, not the patient, decides whether the protocol allows entry.
- Before the next treatment, ask what trial it could close.
Your cancer type is not the only way a trial may find you.
A mutation, fusion, amplification or immune biomarker can sometimes create a trial opportunity involving several different cancer types.
This is why searching only for the word cholangiocarcinoma can miss opportunities.
A trial may instead be looking for a specific biological feature, such as FGFR2, IDH1, HER2, BRAF, KRAS, MSI-H, dMMR or another result found in the tumour.
Patient-led question: What trials match both my cancer and its biology, and could the treatment I am about to start change my eligibility?
UNDERSTANDING THE TRIAL
What am I actually being offered?
Clinical trial
A research study involving people that tests a treatment, intervention or treatment strategy.
See what this means for you
Think of it as treatment with a question attached.
A trial may test a new drug, a new combination, a new way of delivering treatment, or whether an existing treatment works in a different group of patients.
Important: A clinical trial is not automatically better than established treatment, and benefit is never guaranteed.
Ask: What is the main question this trial is trying to answer, and why might the treatment be relevant to my cancer?
Trial protocol
The rulebook that controls how a clinical trial is run.
See what the protocol controls
Think of the trial protocol as the rulebook for the whole study.
Before the trial opens, researchers decide exactly how the study will be run.
The protocol sets rules for things such as:
who can enter,
who cannot enter,
which treatment is given,
the dose and schedule,
which tests and scans are required,
how side effects are managed,
what counts as treatment success,
and when treatment must stop.
Trial question → protocol written → entry rules defined → treatment schedule defined → monitoring defined → results measured.
The protocol is not a suggestion. It is the set of rules the trial team must follow.
This is why a doctor cannot simply ignore an eligibility rule because the treatment looks suitable for you.
If a rule is unclear, the trial team can interpret how it applies to your case, but they still have to work within the protocol.
Ask: Which protocol rule is most important in deciding whether I can enter this trial?
Investigational treatment
A treatment that is still being formally studied for this cancer, this patient group, or this particular use.
See what “investigational” really means
Investigational does not mean “no evidence”.
It means the treatment, or the way it is being used, is still being tested under a formal research protocol.
The treatment may already have:
laboratory evidence,
animal evidence,
early human safety data,
signs of activity,
or approval in another cancer
or treatment setting.
What remains uncertain depends on the trial.
Evidence already exists → important questions remain → treatment is studied formally → more safety and outcome data are collected → the evidence becomes clearer.
Investigational = still being studied.
It does not automatically mean
ineffective,
unsafe,
or completely unknown.
Important: An investigational treatment can still have meaningful uncertainty. Benefit is not guaranteed, and unexpected side effects may still emerge.
Ask: What is already known about this treatment, what is still uncertain, and why might it be relevant to my cancer?
First-in-human trial
The first clinical study in which a new treatment is being given to people.
See what “first-in-human” means
Think of this as the point where a treatment moves from preclinical research into human testing.
Before this point, researchers may already have laboratory and animal evidence.
But the treatment has not yet been tested in people.
Preclinical evidence = what was learned
before human treatment.
First-in-human = the first time
the treatment is being studied in people.
The earliest questions are often about:
what dose can be given,
what side effects appear,
how the body handles the treatment,
and whether there are early signs
of biological or cancer activity.
Laboratory research → preclinical testing → first treatment in people → dose and safety studied → early human evidence begins to build.
Important: First-in-human does not mean there is no scientific reason to study the treatment. It means human evidence is still very limited.
Ask: What has already been learned before this treatment reached people, what is still unknown, and what is this first-in-human study specifically trying to establish?
Phase I trial
An early clinical trial focused heavily on finding a safe dose and understanding how the treatment behaves in people.
See what a Phase I trial is trying to learn
Think of Phase I as finding the treatment's safe operating range in people.
The trial may study:
what dose can be given,
which side effects appear,
how severe those side effects are,
how the body processes the treatment,
and whether there are early signs
that the treatment is affecting the cancer.
Some Phase I trials are also first-in-human studies, but not every Phase I trial is the first time that treatment has ever been given to people.
Treatment enters early human testing → different dose levels may be studied → safety and side effects are measured → biological activity is watched → a dose is selected for further study.
Phase I = early human testing
focused heavily on dose and safety.
It can still produce
meaningful cancer responses.
Important: In a Phase I trial, more uncertainty may remain about dose, side effects, and the chance of benefit than in later-phase trials.
Ask: What is this Phase I trial mainly trying to establish, what dose would I receive, and what evidence already exists that the treatment may affect my cancer?
Phase II trial
A trial that looks more closely at whether the treatment appears to work while continuing to study safety.
See what a Phase II trial is trying to learn
Think of Phase II as asking: does this treatment show enough useful activity to justify further study?
The treatment has usually already passed through earlier human testing.
Researchers now look more closely at:
whether tumours shrink,
whether cancer remains controlled,
how long that control lasts,
which patients appear to benefit,
and what side effects continue to occur.
Early dose and safety information exists → more patients receive the treatment → treatment activity is measured → safety continues to be monitored → evidence builds about whether the treatment is worth taking forward.
Phase II = a stronger test of whether the treatment appears to work.
A Phase II trial may still be relatively small and may not always include a direct comparison with another treatment.
Important: A promising Phase II result does not automatically prove that a treatment is better than established care.
Ask: What evidence of benefit is this Phase II trial looking for, and how will the researchers decide whether the treatment is working?
Phase III trial
A larger trial that compares a new treatment approach with another treatment or established care.
See what a Phase III trial is trying to prove
Think of Phase III as the direct comparison stage.
By this point, there is usually already meaningful information about dose, safety, and signs of treatment activity.
The next question is often:
How does this treatment compare with the current treatment approach?
Patients are often placed into different study arms, and the outcomes of those groups are compared.
Earlier evidence looks promising → larger groups are studied → treatments are compared → important outcomes are measured → researchers determine whether the new approach offers a meaningful advantage or other useful difference.
The trial may compare things such as:
tumour response,
progression-free survival,
overall survival,
side effects,
quality of life,
or other defined outcomes.
Phase III = a larger, structured comparison between treatment approaches.
Important: Being in a Phase III trial does not guarantee that you will receive the new treatment. The trial may assign patients to different treatment arms.
Ask: What treatments are being compared, how would I be assigned to an arm, and what outcome is the trial mainly trying to improve?
Phase IV trial
Research done after a treatment has entered routine use to learn more about how it performs in larger or broader groups of people.
See what Phase IV adds
Think of Phase IV as learning what happens once a treatment moves into much wider use.
Earlier trials may involve carefully selected patients and a more controlled setting.
After a treatment enters routine use, many more people may receive it.
This can reveal things that were difficult to see in smaller earlier studies.
Phase IV can help identify:
longer-term effects,
uncommon side effects,
how the treatment performs
in broader patient groups,
and how it is used
in routine care.
Treatment enters routine use → more patients receive it → longer-term and broader data accumulate → safety and real-world use become clearer.
Phase IV = learning continues after the treatment has moved into routine use.
Important: Approval or routine use does not mean every question about a treatment has already been answered.
Ask: What is this Phase IV study trying to learn that was not fully answered before the treatment entered routine use?
EARLY-PHASE TRIAL LANGUAGE
What do the dose-finding terms mean?
Dose escalation / Dose expansion
Early trial stages used to work out what dose should move forward.
See how the dose is worked out
Think of dose escalation as testing the treatment at different dose levels, one group at a time.
Researchers begin with a planned dose and watch closely for side effects.
If the dose is tolerated, another group may receive a higher dose.
First dose level → safety watched → next dose level may increase → side effects watched again → researchers work out which dose should move forward.
Several terms are commonly used during this process.
DLT
= dose-limiting toxicity.
A side effect serious enough
to limit further dose increase
under the trial rules.
MTD
= maximum tolerated dose.
The highest dose judged tolerable
under that study design.
RP2D
= recommended Phase II dose.
The dose selected
to move forward
for further study.
Once a dose is selected, the trial may move into dose expansion.
Dose expansion means more patients receive the selected dose so researchers can learn more about safety and early signs of treatment activity.
Dose escalation = work out the dose.
Dose expansion = treat more patients
at the selected dose.
Important: Being in the same trial does not necessarily mean every patient receives the same dose.
Ask: Am I entering dose escalation or dose expansion, what dose would I receive, and why was that dose chosen?
GETTING THROUGH THE DOOR
What determines whether I can enter?
Clinical trial eligibility
Whether the trial rules allow you to enter.
See what determines eligibility
Think of eligibility as the key that opens the trial door.
The trial protocol sets the rules for who can enter.
Those rules can include:
cancer type,
tumour location,
stage or extent of disease,
mutations or biomarkers,
previous treatments,
organ function,
ECOG performance status,
other medical conditions,
and the timing
of previous treatment.
Trial looks relevant → protocol rules are checked → medical records and results are reviewed → screening may be required → trial team confirms whether you can enter.
Relevant trial does not automatically mean eligible patient.
Trial listings can be difficult to interpret.
A rule that looks simple may depend on medical detail that is not obvious from the public listing.
Do not rule yourself out from the wording of a trial listing alone.
The trial team should make the formal eligibility assessment.
Important: Eligibility can change. A treatment, progression, change in organ function, or decline in general fitness can open or close a trial opportunity.
Ask the trial team: Could you formally review my case against the protocol and tell me whether I may qualify?
Inclusion criteria
The things you must have or meet to enter a clinical trial.
See what inclusion criteria can include
Think of inclusion criteria as the trial's “must have” list.
These rules define the characteristics a patient needs in order to enter.
They may include things such as:
a particular cancer type,
a specific stage
or extent of disease,
a mutation
or biomarker,
previous treatment,
measurable disease,
acceptable organ function,
or a required ECOG performance status.
Trial question is defined → required patient group is defined → inclusion criteria are written → patient is checked against those rules → eligibility can be confirmed.
Inclusion criteria = what you must meet.
Meeting every inclusion criterion still does not automatically mean you can enter.
You also need to avoid any relevant exclusion criteria.
Ask: Which inclusion criteria do I already meet, and which still need to be confirmed?
Exclusion criteria
The things that can prevent you from entering a clinical trial.
See what exclusion criteria can include
Think of exclusion criteria as the trial's “must not have” list.
These rules identify situations where participation may be unsafe or where the trial results could be difficult to interpret.
Exclusion criteria may include things such as:
certain previous treatments,
treatment given too recently,
particular medical conditions,
active infection,
inadequate organ function,
another active cancer,
specific medications,
or other trial-specific factors.
Trial looks suitable → inclusion criteria are checked → exclusion criteria are checked → screening confirms the details → trial team decides whether entry is allowed.
Inclusion criteria
= what you must meet.
Exclusion criteria
= what must not apply.
Do not assume one exclusion rule applies to you just because the wording looks similar to your situation.
Some rules require specialist interpretation, and the trial team should make the formal decision.
Ask: Is there any exclusion criterion that could prevent me from entering, and does it definitely apply to my case?
Trial screening
The checks performed before you enter a trial to confirm that you actually meet the protocol rules.
See what screening can involve
Think of screening as the final eligibility check before the trial door opens.
The trial team compares your medical information with the protocol rules.
Screening may include:
blood tests,
scans,
medical history,
pathology review,
biomarker confirmation,
heart tests such as an ECG,
a biopsy,
or other trial-specific assessments.
Possible trial found → records reviewed → screening tests completed → protocol rules checked → eligibility confirmed → enrolment can proceed.
Screening = checking.
Enrolment = entering the trial.
Screening can sometimes show that a patient who looked eligible from the trial listing does not meet one of the protocol requirements.
It can also confirm that a patient who was uncertain does in fact qualify.
Important: Do not stop or change treatment simply because screening has started unless the trial team and your treating team have agreed on the plan.
Ask: What screening tests still need to be completed, and when will I know whether I am formally eligible?
Washout period
A required waiting period between your previous treatment and the trial treatment.
See why timing matters
Think of a washout period as a treatment-free gap required by the trial rules.
The purpose is usually to allow enough time for the effects of the previous treatment to reduce before the trial treatment starts.
The required time can depend on:
which treatment you received,
when the last dose was given,
how long its effects may last,
whether side effects have recovered,
and the exact protocol rules.
Current treatment ends → washout period begins → required time passes → recovery and eligibility are checked → trial treatment may begin.
Washout period = required waiting time before the next treatment can start.
The important issue is what happens to the cancer during that waiting period.
Important: Do not stop treatment simply because a trial requires washout. The timing should be planned with both your treating team and the trial team.
Ask before stopping anything: What washout period does this trial require, when would it start, and how will my cancer be managed during that interval?
Informed consent
Your voluntary agreement to enter a clinical trial after the trial has been explained to you.
See what informed consent really means
Think of informed consent as understanding the deal before you agree to enter.
The trial team should explain:
what the trial is testing,
what treatment you may receive,
what procedures are required,
what is already known,
what remains uncertain,
the known risks,
possible benefits,
your other treatment options,
and the practical commitments involved.
You are then deciding whether you understand enough and want to take part.
Trial explained → questions asked → risks and alternatives understood → consent given voluntarily → participation begins.
Consent = permission.
Informed consent = permission given
after understanding
what you are agreeing to.
The written document may be called a Participant Information and Consent Form, or PICF.
Signing it does not remove your right to change your mind.
Important: Participation is voluntary. You can withdraw consent later. Ask what stopping participation would mean for your treatment, follow-up and access to other options.
Ask: What are the major uncertainties, what are my alternatives, and what happens if I decide to leave the trial?
HOW THE TRIAL IS ORGANISED
Which group am I entering?
Study arm
One treatment group inside a clinical trial.
See what a study arm means
Think of a study arm as one treatment pathway inside the same trial.
A trial may have one arm, two arms, or several arms.
Each arm can receive something different.
Arm A might receive
the new treatment.
Arm B might receive
established treatment.
Another arm might receive
a different dose
or treatment combination.
One clinical trial → patients divided into study arms → each arm receives its assigned treatment → outcomes between arms may be compared.
Trial = the whole study.
Study arm = one treatment group
within that study.
In some trials, you and your doctor may know which arm you are entering.
In other trials, the arm may be assigned by randomisation, meaning by chance under the trial rules.
Ask: How many study arms are there, what treatment does each arm receive, and how would I be assigned to one of them?
Trial cohort
A group of patients inside a trial who are being studied together because they share a particular feature.
See what a cohort means
Think of a cohort as a smaller group inside the larger trial.
Patients may be grouped together because they share something important.
That could be:
the same dose,
the same cancer type,
the same mutation
or biomarker,
the same treatment history,
or another feature
defined by the protocol.
One trial → patients divided into cohorts → each cohort shares a defined feature → researchers study what happens in that group.
Study arm = usually a treatment group.
Cohort = a group of patients
being studied together
because they share a defined feature.
Sometimes an expansion cohort is opened after an early dose has been selected.
More patients with a particular cancer or biomarker may then be treated at that selected dose.
Ask: Which cohort would I enter, what defines that cohort, and does it change the treatment or dose I would receive?
Control arm
The treatment group used as the comparison against the study treatment.
See what the control arm does
Think of the control arm as the comparison pathway inside the trial.
Researchers need something to compare the study treatment against.
Depending on the trial, the control arm may receive:
established treatment,
another active treatment,
standard care,
or sometimes a placebo.
Study treatment arm
→ outcomes measured
Control arm
→ outcomes measured
Results compared
→ researchers judge
whether the new approach
provides a meaningful difference.
Control arm does not automatically mean “no treatment”.
In cancer trials, patients in the control arm may still receive an established treatment that would otherwise be appropriate.
If a placebo is used, it may sometimes be added to standard treatment rather than replacing active treatment.
Ask: What exactly does the control arm receive, and how does that compare with the study treatment arm?
Randomisation
Being assigned to a study arm by chance rather than choosing the treatment group yourself.
See why trials use randomisation
Think of randomisation as a neutral way of deciding which study arm a patient enters.
Instead of the patient or treating doctor choosing the arm, the assignment is made according to the trial's randomisation system.
The purpose is to make the treatment groups as fair and comparable as possible.
Patient qualifies for the trial → randomisation occurs → patient is assigned to a study arm → assigned treatment is given → outcomes between groups are compared.
Randomisation = the treatment arm
is assigned by chance.
It does not mean
the treatment itself
is being given randomly.
Some trials use an equal chance of entering each arm.
Others may use a different allocation ratio, such as more patients entering one arm than another.
Important: Before entering a randomised trial, understand every arm you could potentially receive, not only the new treatment arm.
Ask: What are my chances of being assigned to each arm, and what treatment would I receive in every possible arm?
Placebo
A treatment that does not contain the active study medicine.
See what a placebo means in a cancer trial
Think of a placebo as a look-alike treatment without the active study drug.
A placebo may be used so researchers can compare outcomes fairly between study groups.
In cancer trials, the placebo may be added to an established treatment.
Study arm:
standard treatment
+ active study medicine.
Control arm:
standard treatment
+ placebo.
This means a patient in the placebo arm may still receive active cancer treatment.
Patients enter trial → study arms are assigned → one arm receives active study medicine → another may receive placebo → outcomes are compared.
Placebo = no active study drug.
It does not automatically mean
no cancer treatment.
Important: Before entering the trial, understand exactly what every study arm receives.
Ask: Could I receive a placebo, and if so, what other treatment would I still receive in that arm?
Blinding
Whether you, the trial team, or both know which treatment you are receiving.
See what the common blinding terms mean
Think of blinding as controlling who is allowed to know the treatment assignment.
Blinding is used to reduce the chance that expectations influence how symptoms, side effects, or outcomes are reported or assessed.
Open-label
= the treatment assignment is known.
Single-blind
= one side does not know the assignment.
Double-blind
= both the participant
and relevant study staff
are kept unaware
of the assignment
under the trial rules.
Treatment arms created → assignment occurs → blinding rules control who can see that assignment → outcomes are assessed with less influence from expectation.
Blinding = who knows.
Randomisation = how the arm is assigned.
These are different concepts. A trial can be randomised and open-label, or randomised and blinded.
Important: In some circumstances, the treatment assignment can be revealed if the protocol allows it, for example when needed for patient safety.
Ask: Will I know which treatment I am receiving, will the study team know, and under what circumstances can the assignment be revealed?
Basket trial
A trial that groups different cancer types together because they share the same biological target.
See how a basket trial works
Think of a basket trial as grouping cancers by what they have in common, not only by where they started.
Several different cancer types may carry the same molecular feature.
That feature might be:
a mutation,
a gene fusion,
an amplification,
or another biomarker
linked to a particular treatment.
Different cancer types → same biological feature → grouped into the same trial basket → treatment targets that shared feature.
Traditional trial
= grouped mainly by cancer type.
Basket trial
= grouped by a shared biological target
across different cancer types.
This is why molecular and genomic profiling can matter when looking for clinical trials.
A trial may not be labelled specifically as a cholangiocarcinoma trial, but a patient with cholangiocarcinoma may still qualify because the tumour carries the required target.
Important: Having the target does not automatically mean you qualify. The rest of the trial's eligibility rules still apply.
Ask: Does my molecular result qualify me for a basket or tumour-agnostic trial?
HOW SUCCESS IS MEASURED
What result is the trial actually looking for?
Trial endpoint
The result the trial is using to judge whether the treatment achieved what the study was designed to test.
See what an endpoint means
Think of the endpoint as the trial's finish line.
The trial is designed to answer a specific question, and the endpoint is the result used to answer it.
The primary endpoint is the main outcome the trial is designed to assess.
Secondary endpoints measure additional outcomes that also matter.
Primary endpoint
= the main result.
Secondary endpoints
= additional results.
Common cancer-trial endpoints include:
Objective Response Rate (ORR),
Progression-Free Survival (PFS),
Overall Survival (OS),
duration of response,
safety,
and quality of life.
Trial question defined → endpoint chosen → treatment given → outcome measured → trial result interpreted.
A trial result only makes sense when you know what endpoint it was designed to measure.
Ask: What is the primary endpoint of this trial, and what would count as a meaningful result?
Objective Response Rate (ORR)
The percentage of patients whose measurable tumours shrink enough to count as a response under the study rules.
See what ORR actually measures
Think of ORR as asking: how many patients had their measurable cancer shrink enough to count?
The word objective means the response is measured using defined study rules, usually based on scans and measurable tumour size.
A response usually includes:
Complete response
= measurable cancer disappears.
Partial response
= measurable cancer shrinks enough
to meet the study definition of response.
Tumours measured before treatment → treatment begins → scans repeated → tumour measurements compared → complete and partial responses counted → ORR calculated.
ORR = complete responses + partial responses.
Stable disease is generally not counted as an objective response, even though stable disease can still represent useful cancer control.
Important: ORR does not tell you how long a response lasts, whether the cancer later grows again, or whether patients live longer.
Ask: What was the objective response rate, how many patients had complete or partial responses, and how long did those responses last?
Progression-Free Survival (PFS)
The length of time patients live without the cancer meeting the study's definition of progression.
See what PFS actually measures
Think of PFS as the time before the cancer crosses the trial's progression line.
The clock starts from a defined point in the study, such as randomisation or the start of treatment.
Researchers then follow what happens over time.
Study starting point → treatment given → scans and assessments repeated → cancer remains controlled → progression is eventually recorded or the patient is still progression-free at the time of analysis.
PFS = time before the cancer progresses or the patient dies, according to the study definition.
Progression is usually determined using defined trial rules, often based on scans and measurable disease.
PFS does not necessarily mean the cancer is shrinking.
A patient can have stable disease and still be progression-free.
Shrinkage is not required.
The cancer simply has not crossed
the study's definition
of progression.
Important: PFS does not by itself tell you whether patients lived longer overall, how they felt during treatment, or whether the treatment was better in every other way.
Ask: What was the median PFS, how was progression defined, and did the treatment meaningfully delay the cancer getting worse?
Overall Survival (OS)
The length of time patients live from the study's defined starting point.
See what OS actually measures
Think of Overall Survival as the simplest survival question: how long did people live?
The clock starts from a defined point in the study, such as randomisation or the start of treatment.
Researchers then follow how long patients live, regardless of whether the cancer later progresses or another treatment is given.
Study starting point → treatment given → patients followed over time → deaths recorded → survival between groups compared.
OS = time from the study's starting point until death from any cause.
You will often see median overall survival reported.
The median is the point at which half the patients have lived longer and half have lived a shorter time.
Median OS is a group result.
It is not a prediction
of how long one individual patient
will live.
Overall survival can be influenced by treatments patients receive after the study treatment, which can make results more difficult to interpret.
Important: OS tells you about survival. It does not by itself tell you how patients felt, how severe side effects were, or how much the tumours shrank.
Ask: What was the median overall survival, how did it compare between the treatment groups, and was the difference clinically meaningful?
TIMING & FINDING
Do not wait until the current treatment fails.
When to look for clinical trials
Look before you urgently need one.
See when the search should happen
Think of trial searching as part of treatment planning, not as a last-minute rescue search.
You do not need to enter a trial today to identify which trials may matter tomorrow.
The best time to search is often before the next major treatment decision.
Search again when:
molecular or biomarker results arrive,
a new treatment decision is approaching,
treatment stops controlling the cancer,
recurrence is found,
or the disease changes significantly.
Trial identified early → eligibility understood → next treatment decision considered → opportunity protected → trial remains available if it becomes the right next step.
Find the trial before you need the trial.
Important: Trial eligibility can change. A treatment decision made today can sometimes close an option that was open before.
Ask: What clinical trials should we be watching now, even if I do not need one today, and could my next treatment affect eligibility for any of them?
Clinical trials in treatment planning
A clinical trial can be considered alongside other treatment options, not only after every established option is gone.
See why trials belong in the treatment plan
Think of a clinical trial as one possible treatment pathway, not simply the last doorway after everything else has failed.
Some trials may be relevant at first-line treatment, after progression, after a particular biomarker result, or before certain treatments have already been used.
This means trial timing can matter just as much as trial availability.
Treatment options reviewed → relevant trials identified → eligibility checked → next treatment decision considered → trial opportunity protected where appropriate.
The question is not only:
“What treatment can I start now?”
It is also:
“What future treatment opportunity
could this decision close?”
Emerging targeted treatments can sometimes be available first through clinical trials before they become established treatment options.
Your tumour biology may therefore affect both your current treatment choices and the trials worth protecting for later.
Important: Considering a trial does not mean delaying effective established treatment without a clear reason. The aim is to understand the available pathways before making the next decision.
Ask before choosing the next treatment: What trials could I qualify for now, what trials may matter later, and could the treatment we are about to start make me ineligible for any of them?
Finding a clinical trial
Searching for trials that match your cancer, tumour biology, treatment history, location, and current health.
See how to search more effectively
Think of trial searching as matching several pieces at the same time.
A useful search usually starts with:
cancer type and location,
stage and current disease status,
molecular and biomarker results,
treatments already received,
current health and organ function,
and where you can realistically travel.
Searching only for “cholangiocarcinoma” can miss opportunities.
A trial may instead be organised around a biological feature, such as a specific mutation or gene fusion, and include patients with several different cancer types.
Understand tumour biology → search broadly → identify possible trials → contact the trial site → trial team checks eligibility → treatment opportunity confirmed or excluded.
Search broadly.
Let the trial team
decide eligibility.
Trial listings can be difficult to interpret. A listing may appear unsuitable while still containing a relevant cohort, amendment, or eligibility detail that needs confirmation from the study team.
Important: Do not rule yourself out from a potentially relevant trial based only on a brief online listing. Eligibility should be checked against the current protocol by the trial team.
Ask: Which trials match both my cancer and my tumour biology, and has the trial team formally reviewed my eligibility?
PRACTICAL ACCESS
Can I actually get to the treatment?
Clinical trial costs
The costs connected with taking part in a clinical trial, including what the trial pays for and what you may still need to pay.
See which costs need to be checked
Think of trial access as having two parts: the treatment itself, and the practical cost of reaching and staying on that treatment.
Depending on the trial, the study sponsor may cover some or all of:
the investigational treatment,
trial-specific tests,
additional scans,
study visits,
or procedures required
only because of the trial.
Other costs may still fall to the patient, health system, or insurer.
These can include:
travel,
accommodation,
meals,
time away from work,
support for a caregiver,
and some parts
of ordinary medical care.
Trial identified → treatment costs checked → travel and accommodation checked → reimbursement options checked → practical pathway understood → decision made with the full cost visible.
Free study drug does not automatically mean free trial participation.
Important: Ask about costs before committing to travel or starting the screening process, especially if the trial is interstate or overseas.
Ask: What costs does the trial cover, what costs would I need to pay, and is any support available for travel, accommodation, or other participation expenses?
Medical Treatment Overseas Program (MTOP)
An Australian Government program that may fund approved Australians to receive life-saving treatment overseas when that treatment, or an effective alternative, is not available in Australia in time to benefit them.
See what MTOP can and cannot fund
Think of MTOP as a pathway for accessing an established treatment overseas when Australia cannot provide that treatment, or an effective alternative, in time.
To be approved, the proposed overseas treatment must meet specific eligibility rules.
The treatment must:
be for a life-threatening condition,
not be available in Australia
in time to benefit the patient,
significantly extend life
and potentially cure the condition,
have a real prospect of success,
and be accepted
by the Australian medical profession
as a standard treatment
for that condition.
MTOP may cover approved costs such as medical treatment, hospital accommodation, travel, non-hospital accommodation, and some costs for one carer.
Specific overseas treatment identified → Australian specialist supports application → eligibility criteria assessed → application approved or declined → approved treatment and associated support funded.
MTOP = established overseas treatment.
MTOP ≠ funding for
an overseas clinical trial.
Important: MTOP does not fund experimental treatments, overseas clinical trials, overseas medical advice alone, or treatment sought simply because it is not publicly funded in Australia.
An Australian treating specialist must apply on behalf of the patient and provide the required medical evidence.
Ask: Is there an established treatment overseas that is not available to me in Australia in time, and does my situation meet the MTOP eligibility criteria?
Named Patient Pharmaceutical Assessment (NPPA)
A New Zealand Pharmac pathway that can consider funding a medicine for an individual patient whose clinical circumstances fall outside normal funded access.
See when NPPA may be relevant
Think of NPPA as an exception pathway when the normal medicine-funding pathway does not fit the individual patient.
An authorised prescriber can apply to Pharmac for funding consideration where a patient's clinical circumstances are exceptional and their treatment need is not met through normal funded access.
Medicine identified
→ routine funding does not cover this situation
→ prescriber assesses NPPA suitability
→ application submitted to Pharmac
→ individual funding decision.
Important: NPPA funding is not automatic. Pharmac assesses each application against its NPPA policy and funding considerations.
The application must be made by an authorised prescriber.
Ask: This medicine appears clinically relevant to my cancer but is not routinely funded for my situation. Will you assess whether an NPPA application to Pharmac is appropriate for me?
Expanded access
A pathway that may allow a patient to receive an investigational treatment outside a clinical trial.
See how expanded access works
Think of expanded access as asking whether the treatment can come to the patient when the patient cannot enter the trial.
The treatment is still investigational. It has not simply become standard treatment because expanded access is requested.
Access usually depends on several separate decisions.
The treating doctor must be willing
to use the treatment.
The company developing the treatment
must be willing and able
to supply it.
The required regulatory
and hospital approvals
must also be obtained.
Potential treatment identified → clinical trial access checked → treating doctor contacts company → company considers supply → regulatory pathway completed → treatment provided if approved.
Expanded access
is not automatic access.
It is a request
that requires agreement
from several parties.
A company may decline an expanded access request for reasons such as limited drug supply, insufficient safety information, inability to support treatment, or concern that use outside the trial is not appropriate.
Important: A clinical trial should usually be checked first. Expanded access is generally considered when a relevant investigational treatment exists but trial participation is not available or possible.
Ask: If I cannot enter the trial, will my treating doctor contact the company and ask whether expanded or compassionate access is possible?
Special Access Scheme (SAS)
An Australian pathway that can allow an individual patient to access a therapeutic product that is not approved for general supply in Australia.
See how the SAS works
Think of the SAS as a regulated doorway for an individual patient to receive an unapproved treatment outside normal Australian approval.
The treatment may still be under investigation, approved overseas, or otherwise unavailable through normal Australian supply.
Access must be organised through an appropriate health practitioner.
SAS has three pathways:
Category A
= notification pathway
for seriously ill patients
who meet the defined criteria.
Category B
= application pathway
when Categories A or C
do not apply.
TGA approval is required
before treatment is supplied.
Category C
= notification pathway
for specified unapproved products
with an established history of use
for listed circumstances.
Potential treatment identified → treating clinician considers suitability → supply from manufacturer or sponsor checked → correct SAS pathway identified → notification or approval completed → treatment supplied if all requirements are met.
SAS = regulatory permission pathway.
It does not itself guarantee
that the medicine will be supplied,
funded,
or clinically appropriate.
Access can therefore depend on more than TGA requirements.
The treating clinician, hospital, manufacturer or sponsor, and other relevant authorities may also need to agree before treatment can proceed.
Important: An unapproved therapeutic good has not been approved by the TGA for general Australian supply. Potential benefit, uncertainty, safety, cost, and available alternatives still need to be considered.
Ask: If this treatment is not approved for normal supply in Australia, is there a Special Access Scheme pathway, which category would apply, and who needs to make the request?
A clinical trial should not appear for the first time when the current treatment has already failed.
The practical rule is simple: understand your tumour biology, know which trials may fit it, and know what could change your eligibility.
Find the trial before you need the trial.
Eligibility can change.
The trial team decides whether you qualify.
Before the next treatment,
ask what trial it could close.
Integrative
Support the body while treatment does its job
Integrative approaches sit alongside cancer treatment. Their job is to protect strength, nutrition, sleep, function and treatment tolerance without interfering with the treatment plan.
Integrative care
Approaches used alongside established cancer treatment to protect function, recovery and the ability to keep treating.
Think of it like this
Think of cancer treatment as the main engine. Integrative care supports the systems that help that engine keep running.
It is used alongside surgery, chemotherapy, radiation, immunotherapy and targeted therapy.
It is not a replacement for them.
What is its job?
Its job is to help protect:
• nutrition
• muscle and strength
• sleep
• physical function
• symptom control
• recovery
• treatment tolerance.
Ask:
“What can I do alongside treatment
to protect my ability to keep treating?”
Nutrition during treatment
Eating and absorbing enough nutrition to protect weight, muscle, strength and recovery during treatment.
Think of it like this
Think of nutrition as both fuel and building material.
Treatment can increase the body's demands at the same time appetite, digestion or absorption becomes harder.
Why bile flow matters
Bile normally reaches the duodenum and helps the body digest and absorb dietary fat.
If bile flow is reduced or blocked, digestion and absorption of fats and fat-soluble nutrients can become more difficult.
Major biliary or pancreatic surgery can also change digestion and nutrient absorption.
That means nutrition support in cholangiocarcinoma is not just about how much food you eat. It can also be about whether the digestive system is able to deliver and absorb that nutrition effectively.
When should I ask for help?
Ask for specialist nutrition support if you are:
• losing weight without trying
• struggling to eat enough
• losing muscle or strength
• having persistent nausea or diarrhoea
• having pale, oily or difficult-to-flush stools
• having trouble digesting food
• recovering from major biliary or pancreatic surgery.
Ask:
“Am I eating enough,
and am I absorbing enough nutrition
to protect my weight,
muscle
and ability to tolerate treatment?”
Exercise & strength
Appropriate movement and strength work used to preserve muscle, function and physical capacity during treatment.
Think of it like this
Think of muscle as reserve capacity.
Protecting useful physical reserve can help preserve capacity for treatment, recovery and everyday function.
What needs to be considered?
Exercise needs to match your condition.
Treatment, recent surgery, infection, anaemia, bone problems, falls risk, pain and overall fitness can all change what is appropriate.
Ask:
“What level of movement
and strength work is safe for me during treatment?”
Sleep
Protecting sleep and treating problems that interfere with rest and recovery.
Think of it like this
Think of sleep as the body's maintenance shift.
Poor sleep can compound fatigue, concentration problems and recovery difficulties.
What can disrupt it?
Sleep can be disrupted by:
• pain
• anxiety
• steroids and other medicines
• nausea
• hospital routines
• treatment side effects
• changes in normal activity.
Ask:
“What is disrupting my sleep,
and can that cause be treated directly?”
Stress & recovery
Reducing avoidable practical, emotional and physical load while treatment is already demanding.
Think of it like this
Think of stress like keeping an engine at high revs.
Continuous load can make sleep, attention and recovery harder.
What is the aim?
The aim is not to “think positive”.
It is to identify unnecessary load and reduce what can actually be reduced.
Support may include psychological care, practical help, better symptom control and treatment of sleep problems.
Ask:
“What part of my current load
can actually be reduced or better managed?”
Managing treatment side effects
Identifying and controlling treatment side effects early enough to protect function and treatment tolerance.
Think of it like this
Think of side effects as friction.
Enough friction can slow treatment down, force dose changes or stop treatment altogether.
What should be managed early?
Problems such as:
• nausea and vomiting
• diarrhoea
• constipation
• pain
• fatigue
• neuropathy
• mouth problems
• poor appetite
• sleep disruption
should be reported early rather than simply endured.
Ask:
“Which side effects could threaten my ability
to stay on treatment
if we do not control them early?”
Supplements & interactions
Vitamins, herbs and other supplements can interact with cancer treatment or other medicines.
Think of it like this
Think of every supplement as another chemical entering the same system as your treatment.
“Natural” does not automatically mean neutral.
What can go wrong?
Supplements can affect:
• drug metabolism
• bleeding risk
• liver function
• kidney function
• other medicines
• treatment activity.
This does not mean every supplement is unsafe. It means the interaction needs to be checked.
What should I do?
Keep a complete list of every vitamin, herb, powder, tea, complementary medicine and non-prescription product you use.
Show that list to your treating team or oncology pharmacist.
Ask:
“Does anything I am taking interact
with my cancer treatment,
liver function
or other medicines?”
Conditions of Cause
A way of understanding the biological conditions that have contributed to this cancer developing.
Think of it like this
Think of treatment as dealing with the fire.
Conditions of Cause asks: what was happening in the biological environment that has made the ground easier to burn?
Start with bile
In cholangiocarcinoma, the biological environment of the bile ducts matters.
That means looking first at:
• bile composition
• bile flow
• obstruction or stagnation
• repeated biliary injury
• infection or inflammation within the biliary system.
These conditions can then sit upstream of other biological pressures such as:
• chronic inflammation
• tissue injury
• repeated repair
• metabolic stress
• immune pressure.
What happens downstream if bile does not reach the duodenum properly?
Bile has another important job: it must reach the duodenum to help digest and absorb dietary fat.
If bile flow is reduced, blocked or diverted, the downstream digestive system can receive less bile than it needs.
That can impair fat digestion and reduce absorption of fat-soluble nutrients.
Over time, poor digestion, reduced nutrient delivery, weight loss and loss of muscle can add another layer of physiological stress.
This matters during treatment because the patient may be dealing with both the cancer and a digestive system that is less able to deliver the nutrition needed to maintain strength.
What is established and what is still being investigated?
It is established that bile flow is important for normal biliary function and for fat digestion and absorption.
It is also established that some chronic biliary conditions and repeated biliary injury increase cholangiocarcinoma risk.
The wider question of exactly how changes in bile composition, bile flow, inflammation, metabolism and immune pressure combine over time to create the conditions in which cholangiocarcinoma develops remains an area of research.
Ask:
“What was happening in my biliary system
before this cancer developed,
and which biological conditions
can still be improved now?”
Using integrative approaches safely
Making sure any additional approach strengthens the treatment plan rather than interfering with it.
Think of it like this
Think of the treatment plan as one system.
Every new addition should fit into that system rather than compete with it.
What needs to be checked?
Consider any integrative approach in the context of:
• current cancer treatment
• surgery plans
• prescription medicines
• liver function
• kidney function
• bleeding risk
• infection risk
• individual medical conditions.
The decision
The question is not simply: “Is this natural?”
The better question is: “Does this strengthen the treatment pathway without creating a new risk?”
Ask:
“Does this approach support my treatment plan,
or could it interfere with it?”
PALLIATIVE CARE
Reduce the load while you live with cancer
Palliative care is an additional layer of care that helps control symptoms, protect function and reduce the physical, emotional and practical burden of cancer. It can work alongside active cancer treatment and does not automatically mean treatment is stopping.
Think of palliative care as adding another specialist team to your side.
Your cancer team is focused on treating the cancer. Palliative care focuses on reducing the load the cancer and its treatment are placing on you and the people supporting you.
Sometimes that means controlling a symptom. Sometimes it means identifying a reversible cause of the symptom. Sometimes it means protecting function, helping with difficult decisions, coordinating care, or supporting your family.
- Identify what is making life or treatment harder.
- Ask whether there is a reversible cause.
- Control the symptom or burden now.
- Protect function and treatment capacity where possible.
- Add support for family and caregivers when needed.
- Palliative care is an extra layer of care, not a surrender of treatment.
- It can work alongside active cancer treatment.
- Symptoms are signals. Where possible, treat the cause as well as the symptom.
- Palliative care also supports family and caregivers.
- End-of-life care is part of palliative care, but palliative care is much broader.
UNDERSTANDING PALLIATIVE CARE
What am I actually being offered?
Palliative care
Care that helps reduce the burden of serious illness and helps you live as well as possible.
See what palliative care really means
Think of palliative care as another layer of care added around you.
Cancer treatment focuses on controlling or removing the cancer.
Palliative care focuses on reducing the burden created by the illness, treatment and its effects on daily life.
This can include help with:
pain, nausea, breathlessness, fatigue, appetite, sleep, bowel problems, emotional distress, practical problems, treatment decisions, family support and planning ahead.
Problem identified → cause considered → symptom or burden treated → function protected → daily life and treatment become easier to manage.
Palliative care = reducing the load.
It does not automatically mean
stopping cancer treatment.
Ask: What symptoms, problems or treatment burdens could palliative care help me manage now?
Specialist palliative care
A team with additional expertise in complex symptoms, serious illness and the practical burden of care.
See what the specialist team adds
Think of specialist palliative care as bringing in another expert team when the load becomes harder to manage.
The team can include:
palliative care doctors, nurses, GPs, physiotherapists, occupational therapists, psychologists, social workers and other health professionals.
Not every patient needs every member of the team.
The right support depends on the problem that needs solving.
Complex burden identified → specialist team involved → causes and symptoms assessed → care coordinated → treatment adjusted as needs change.
Ask: Would a specialist palliative care team add anything to the support I am already receiving?
Palliative care with active treatment
Receiving palliative care while treatment directed at the cancer continues.
See how the two can work together
Think of it as two teams working on different parts of the same problem.
One team may be treating the cancer with chemotherapy, immunotherapy, targeted therapy, radiation, procedures or another treatment.
The palliative care team can work at the same time to control symptoms, preserve function and reduce treatment burden.
Cancer treatment
= acts on the disease.
Palliative care
= reduces the burden created by the disease and treatment.
Better symptom control can sometimes make it easier to eat, move, sleep, attend appointments and continue treatment.
Important: Palliative care is not the same thing as a palliative treatment goal. A patient may receive palliative care while the cancer team is still actively treating the disease.
Ask: Can palliative care be added now while my current cancer treatment continues?
Palliative care is not the same as end-of-life care
Palliative care can begin much earlier and can continue while cancer treatment is still being given.
See the important distinction
Think of palliative care as the larger umbrella.
It can support someone through serious illness for months or sometimes years.
End-of-life care is care for the final phase of life.
Palliative care
can begin earlier.
End-of-life care
is one part of palliative care.
The same palliative team may provide support at both stages, but the goals and circumstances are different.
Ask: Are you referring me for additional symptom and support care while treatment continues, or are you recommending a change in the overall treatment goal?
REDUCING THE LOAD
What can palliative care actually do?
Symptom control in palliative care
Reducing symptoms while also checking whether there is a treatable cause behind them.
See how symptom control should work
Think of a symptom as both a burden and a signal.
Pain, nausea, breathlessness, fatigue, itching, poor appetite or constipation can make daily life and treatment much harder.
Relief matters.
But the next question is: what is causing the symptom?
Symptom appears → immediate burden reduced → cause investigated → reversible problem treated where possible → symptom control adjusted.
For example, severe itching in cholangiocarcinoma may require symptom relief, but impaired bile flow, obstruction or drainage problems may also need assessment.
Treat the symptom.
Look for the cause.
Fix what can be fixed.
Ask: What is causing this symptom, what can relieve it now, and is there an underlying problem we can treat?
Support for family & caregivers
Support for the people carrying the practical and emotional load alongside the patient.
See how palliative care can support the family
Think of serious illness as weight carried by more than one person.
Partners, family members and caregivers may be carrying:
appointments, medicines, transport, meals, symptom monitoring, communication, practical decisions and emotional strain.
Palliative care can help by providing information, counselling, respite, practical support, service coordination and preparation for changes in care.
Caregiver load identified → support needs clarified → services added → practical pressure reduced → patient and family better supported.
Ask: What support is available for the people helping carry this with me?
GETTING HELP
When should I involve the team?
Palliative care referral
Bringing palliative care into your care when symptoms, treatment burden or practical problems need additional support.
See when a referral may help
Think of referral as calling for help while there is still time to use that help.
Referral may be useful when symptoms, treatment side effects, reduced function, emotional distress or practical problems are making daily life harder.
It may also help when treatment choices or future care decisions are becoming more complex.
You do not have to wait until treatment ends.
A GP, oncologist, specialist or another healthcare provider can usually help organise referral.
In some parts of Australia, self-referral may also be possible.
Ask: Would involving palliative care now make treatment or daily life easier to manage?
Finding palliative care
Finding the service that can provide the right support where you live.
See how to find the right service
Think first about what help you need and where you need it.
Palliative care may be delivered:
at home,
in hospital,
through community services,
in a specialist palliative care unit,
in a hospice,
or in residential aged care.
Services and referral pathways vary across Australia.
Need identified → referral requested → local service located → needs assessed → care provided in the most appropriate setting.
Ask: Can you refer me to a palliative care service that can work alongside my cancer team and provide support where I live?
Patient-led question: What is making life or treatment harder right now, what part of that burden can be reduced, and is there a cause we can treat rather than only managing the symptom?
SECTION 10
When Treatment Changes
A treatment change is a decision point. First understand why the plan is changing, then determine what opportunity should be protected next.
Think of treatment as a route, not a single road.
Sometimes the current route needs to be adjusted. Sometimes it needs to be replaced.
The important question is not simply: “Why are we stopping?”
It is: “What changed, what does that change mean, and what should happen next?”
- Identify exactly why the treatment plan is changing.
- Separate cancer progression from side effects, tolerance or completion of treatment.
- Ask whether the current treatment can be adjusted safely.
- If it must change, reassess the available treatment pathways.
- Before starting the next treatment, protect any trial, targeted treatment or curative opportunity that could be lost.
- A treatment change does not automatically mean the cancer has progressed.
- Dose reduction does not automatically mean the treatment has stopped working.
- Stopping one treatment does not mean there are no other treatment options.
- Understand why the current treatment is changing before choosing the next one.
- Before the next treatment starts, ask what future opportunity it could close.
WHY IS THE PLAN CHANGING?
First identify what changed
Treatment resistance
When cancer is not adequately controlled by a treatment or stops responding after initially being controlled.
See what resistance really means
Think of treatment resistance as the cancer finding a way to keep growing despite the treatment.
Resistance can be present from the beginning, or it can develop after a treatment has worked for some time.
Primary resistance
= the treatment never controls the cancer well enough.
Acquired resistance
= the treatment works first,
then the cancer finds a way around it.
Treatment given → cancer initially controlled or not controlled → resistant cancer cells survive or emerge → cancer grows despite treatment → treatment strategy reassessed.
Important: Resistance to one treatment does not mean resistance to every treatment.
Ask: What evidence shows that this cancer is resistant to the current treatment, and what does that tell us about the next treatment?
Refractory
A medical term meaning the cancer is not responding adequately to a treatment.
See what this word means in practice
Think of refractory as a label describing the relationship between the cancer and a particular treatment.
It does not mean that every possible treatment has stopped working.
Refractory to Treatment A does not automatically mean refractory to Treatment B.
Ask: Refractory to which treatment, and what treatment pathways remain open?
Treatment failure
A term used when a treatment has not achieved the result it was intended to achieve.
See what needs to be clarified
The important question is: what was the treatment meant to achieve?
A treatment may be considered unsuccessful because the cancer progressed, because the treatment could not be tolerated, or because it did not achieve the intended treatment goal.
Treatment failure
= this treatment did not achieve
what it needed to achieve.
It does not equal
“nothing else can be done.”
Ask: What exactly failed, what was this treatment meant to achieve, and what options remain?
ADJUSTING THE CURRENT TREATMENT
Does the treatment need to stop, or can it be changed?
Dose reduction
Giving a lower dose of the same treatment than was originally planned.
See why a dose may be reduced
Think of dose reduction as changing the intensity, not necessarily abandoning the treatment.
Dose may be reduced because of:
side effects,
blood-count changes,
liver or kidney function,
cumulative toxicity,
weight or general health,
or difficulty recovering between cycles.
Treatment given → side effects or tolerance assessed → dose adjusted → treatment continues → response and safety reassessed.
Ask: Why is the dose being reduced, what are we trying to protect, and how will we know whether the reduced dose is still doing what we need it to do?
Treatment discontinued
The current treatment has been stopped.
See why treatment may be stopped
“Stopped” tells you what happened. It does not tell you why.
Treatment may be discontinued because:
the planned course is complete,
the cancer has progressed,
side effects are too severe,
organ function has changed,
the patient chooses to stop,
or another treatment is considered more appropriate.
Current treatment reviewed → reason for stopping identified → cancer and patient reassessed → remaining options reviewed → next treatment decision made.
Ask: Why exactly is this treatment being stopped, and what does that reason mean for my next options?
CHOOSING WHAT COMES NEXT
Do not move forward before checking what the next decision could close
Treatment reassessment
Reviewing the cancer, the patient and the available treatment opportunities before choosing the next step.
See what should be reassessed
Think of reassessment as stopping at the junction before choosing the next road.
Before moving on, the team may need to reconsider:
where the cancer is now,
how it responded to previous treatment,
whether surgery or another local treatment is possible,
whether tumour biology has created a targeted option,
whether a clinical trial is relevant,
and whether the patient is fit for the available choices.
Treatment changes → situation reassessed → opportunities reopened or excluded → next pathway chosen → treatment begins.
Important: Starting another treatment can sometimes change trial eligibility or other future opportunities.
Ask before the next treatment: What has changed, what options should now be reconsidered, and could this next treatment close another opportunity?
Best supportive care (BSC)
Care focused on controlling symptoms, reducing treatment burden and helping a person function and feel as well as possible.
See what needs to be clarified
“Best supportive care” tells you the focus of part of the care, but it does not always tell you whether cancer-directed treatment is also being given.
Supportive care can include:
pain control,
nausea treatment,
nutrition support,
management of breathlessness,
fatigue,
psychological support,
practical support
and palliative care.
Important: Do not assume that “best supportive care” automatically means there are no cancer-directed treatment options. Clarify what the treating team means in your situation.
Ask: When you say “best supportive care”, are you recommending supportive care alongside active cancer treatment, or are you recommending that cancer-directed treatment stops?
Patient-led question: Why is the treatment plan changing, what has that change taught us, and what opportunity should be protected before the next treatment begins?
DIAGNOSIS & CANCER TYPE
Know exactly what has been diagnosed
The name of the cancer, where it started and what the cells look like help determine which treatment pathways apply.
Think of diagnosis as giving the cancer its correct address and identity.
“Bile duct cancer” tells you the broad cancer family. “Cholangiocarcinoma” is its medical name. “CCA” is the abbreviation.
The next question is where in the bile duct system the cancer began.
That location can change the surgery, procedures, staging and treatment pathways that may be possible.
- Confirm the exact cancer name.
- Identify where the cancer started.
- Identify the cholangiocarcinoma subtype.
- Understand what the pathology says about the cells.
- Use that information to guide the treatment pathway.
- Bile duct cancer is called cholangiocarcinoma.
- Cholangiocarcinoma is often shortened to CCA.
- Where the cancer began matters.
- Intrahepatic, perihilar and distal cholangiocarcinoma are different anatomical subtypes.
- Grade, stage and cancer type describe different things.
WHAT CANCER IS IT?
Start with the correct name
Bile duct cancer (cholangiocarcinoma / CCA)
Bile duct cancer is called cholangiocarcinoma, often shortened to CCA.
See what cholangiocarcinoma means
Think of the bile ducts as a branching drainage network.
They carry bile from the liver towards the small intestine.
When cancer begins in the cells lining this bile duct system, it is called cholangiocarcinoma.
Bile duct cancer = cholangiocarcinoma = CCA.
The important next step is to identify exactly where in that network the cancer began.
Bile duct cancer diagnosed → exact starting location identified → anatomical subtype named → surgery and treatment pathways assessed.
Ask: Where exactly in my bile duct system did my cancer begin?
Primary cancer / Primary site
The place in the body where the cancer first began.
See why the starting point matters
Think of the primary site as the cancer's original address.
If cholangiocarcinoma later spreads to the lung, the cancer in the lung is still cholangiocarcinoma.
It is not automatically a new lung cancer.
Where cancer spreads is not the same thing as where it started.
Ask: What is the confirmed primary site of my cancer?
WHERE DID IT START?
The anatomical type changes the pathway
Intrahepatic cholangiocarcinoma (iCCA)
Cholangiocarcinoma that begins in the bile ducts inside the liver.
See where iCCA begins
Picture the bile ducts as small branches running through the liver.
Intrahepatic cholangiocarcinoma begins in those bile ducts inside the liver.
When complete removal is possible, surgery generally involves removing the part of the liver containing the cancer.
Ask: Is my cancer intrahepatic, and has it been assessed for complete surgical removal?
Perihilar cholangiocarcinoma (pCCA)
Cholangiocarcinoma that begins where the main right and left bile ducts meet near the liver hilum.
See why location matters here
Think of the hilum as the main junction where the right and left liver ducts come together.
Perihilar cholangiocarcinoma begins around this junction.
Surgery can therefore involve:
bile duct removal,
liver resection,
lymph node removal,
and sometimes reconstruction
involving nearby blood vessels
or bile drainage.
Important: Assessment by a surgeon experienced in perihilar cholangiocarcinoma can be important because operability may depend on specialised surgical expertise.
Ask: Has my cancer been assessed by a surgeon experienced in perihilar cholangiocarcinoma?
Distal cholangiocarcinoma (dCCA)
Cholangiocarcinoma that begins in the lower bile duct as it approaches and passes through the pancreas.
See where distal CCA begins
Picture the bile duct travelling downward from the liver towards the small intestine.
The distal bile duct is the lower part that passes close to and through the pancreas.
Because the bile duct, pancreas and duodenum are closely connected here, surgery usually requires removal and reconstruction of several connected structures.
Ask: Is my cancer distal cholangiocarcinoma, and has it been assessed for a Whipple procedure?
Extrahepatic cholangiocarcinoma
A general term for cholangiocarcinoma that begins in bile ducts outside the liver.
See what extrahepatic includes
Extrahepatic simply means outside the liver.
It includes:
perihilar cholangiocarcinoma,
and distal cholangiocarcinoma.
Those two locations have different surgical and treatment pathways.
Ask: Is my extrahepatic cholangiocarcinoma perihilar or distal?
WHAT DO THE CELLS LOOK LIKE?
Pathology gives the cancer another layer of identity
Adenocarcinoma
A cancer arising from gland-forming or secretory-type epithelial cells.
See what this word is telling you
Adenocarcinoma describes what kind of cancer cell the pathologist sees.
It does not by itself tell you where the cancer started.
Adenocarcinoma
= cell type.
Cholangiocarcinoma
= cancer defined by its origin
in the bile duct system.
Ask: Does the pathology confirm adenocarcinoma consistent with a bile duct primary?
Differentiation
How much the cancer cells still resemble the normal cells they came from.
See what well, moderate and poor mean
Think of differentiation as asking how much the cancer cell still resembles its original normal cell.
Well differentiated
= looks more like normal tissue.
Moderately differentiated
= sits between the two.
Poorly differentiated
= looks much less like normal tissue.
Poorly differentiated cancers may behave more aggressively, but differentiation is only one part of understanding the cancer.
Ask: How differentiated is my tumour, and does that change how you interpret its behaviour?
Tumour grade
A pathology description of how abnormal the cancer cells look and how aggressively they may be expected to behave.
See the difference between grade and stage
Think of grade as what the cells look like, and stage as where the cancer is.
Grade
= microscopic appearance
and expected behaviour.
Stage
= how far the cancer
has grown or spread.
A tumour can therefore have a particular grade and a completely separate stage.
Ask: What is the tumour grade, and how is that different from my cancer stage?
Malignant
Cancerous. A malignant tumour can invade nearby tissue and may spread elsewhere.
Benign
Not cancerous. A benign growth does not spread to distant parts of the body.
Patient-led question: What exactly is my cancer called, where did it begin, and what does that location change about my treatment options?
STAGING & SPREAD
Where is the cancer now?
Stage is a map of where the cancer has been found. The stage number matters, but the locations underneath that number are what help determine which treatment opportunities remain.
Think of staging as drawing the cancer onto a map.
Start with where it began. Then mark what it has grown into nearby, which lymph nodes are involved, and whether it has established disease somewhere else.
The important question is not only: “What stage am I?”
It is: “What specifically is on my map, where is it, and what does that change about my treatment options?”
- Identify the primary tumour and what it has grown into nearby.
- Identify which lymph nodes are involved.
- Identify whether distant metastatic disease exists.
- Translate the stage number back into the actual anatomy.
- Ask what that pattern means for surgery, local treatment and systemic treatment.
- Stage is a summary. The actual locations matter more.
- T = the main tumour.
- N = nearby lymph nodes.
- M = distant metastatic disease.
- Stage IV does not describe the number, location or biology of every metastatic site.
READING THE MAP
What does the stage actually describe?
Cancer stage
A summary of how much cancer has been found and how far it has grown or spread.
See what the stage number really tells you
Think of the stage number as the headline on the map.
The detail underneath that headline matters more when treatment decisions are being made.
Two people can both be called Stage IV while having very different patterns of disease, tumour biology and treatment opportunities.
Stage = summary.
Location = detail.
Cancer identified → extent mapped → stage assigned → actual locations reviewed → treatment pathways assessed.
Ask: What specifically makes my cancer this stage, and exactly where has disease been found?
TNM staging
A staging system that breaks the cancer map into the main tumour, nearby lymph nodes and distant spread.
See what T, N and M mean
Think of TNM as three layers of the same map.
T
= the main tumour
and how far it has grown locally.
N
= whether nearby lymph nodes
contain cancer.
M
= whether distant metastatic disease
has been identified.
Main tumour mapped → nodes mapped → distant spread assessed → TNM recorded → overall stage interpreted.
Ask: What are my T, N and M results, and which part is most important to my treatment decision?
T stage
T describes the main tumour and what nearby tissue or structures it has grown into.
See what the T number means
Think of T as the local footprint of the main tumour.
A higher T number generally means the tumour has grown further locally.
What each T number means depends on where the cholangiocarcinoma began.
Do not stop at the T number.
Translate it into
the actual structures involved.
Ask: What structures make my tumour this T stage, and do any of them prevent curative surgery?
N stage
N describes whether cancer has been found in nearby lymph nodes.
See what lymph node staging means
Think of lymph nodes as checkpoints positioned along drainage pathways around the body.
Cancer cells can travel into these nodes.
Not every lymph node has the same staging meaning.
Regional node
= nearby in staging terms.
Distant node
= metastatic spread.
Ask: Which lymph nodes are involved, and are they considered regional or distant?
M stage
M describes whether cancer has established disease in a distant part of the body.
See what M1 does and does not tell you
M tells you whether distant disease exists.
It does not tell you:
how many sites there are,
how large they are,
where they are,
or whether some can be treated directly.
Ask: Where exactly is the metastatic disease, how many sites are there, and are any local treatment options still relevant?
LOCAL & REGIONAL SPREAD
What has the cancer reached nearby?
Localised disease
Cancer that remains around the place where it began and has not been found in distant parts of the body.
See why localised does not automatically mean removable
Think of localised disease as cancer that has stayed in the local neighbourhood.
That does not automatically mean it can be removed.
A tumour can still involve:
blood vessels,
bile ducts,
liver structures,
or nearby organs.
Ask: Has my cancer been assessed directly by a surgeon with high-volume cholangiocarcinoma experience to determine whether it can be completely removed?
Locally advanced
Cancer that has grown into important nearby structures but has not necessarily established distant metastatic disease.
See what may be creating the local barrier
Think of locally advanced disease as a local barrier problem.
The tumour may involve a major blood vessel, nearby organ or another structure that currently prevents complete removal.
Local barrier identified → specialist surgical assessment → reconstruction or downstaging considered → operability reassessed.
Ask: What exactly is preventing surgery today, and what would need to change for curative-intent surgery to become possible?
Regional disease
Cancer that has moved beyond where it began into nearby tissue or regional lymph nodes, but not into a distant part of the body.
See what regional means
Regional means nearby in staging terms.
The exact definition depends on where the cholangiocarcinoma began.
Regional spread ≠ distant metastasis.
Ask: What part of my disease is considered regional, and does it change whether surgery is possible?
Lymph node involvement
Cancer cells have been found in one or more lymph nodes.
See why node location matters
Not every positive lymph node means the same thing.
Nearby regional nodes and distant nodes can affect staging differently.
Positive node identified → exact node location mapped → regional or distant classification made → staging and treatment implications assessed.
Ask: Which lymph nodes are involved, how many are involved, and are they regional or distant?
DISTANT SPREAD
If the cancer has travelled, what pattern has it created?
Metastasis / Metastatic disease
Cancer that has travelled from where it began and established disease somewhere else.
See what metastatic disease means
Think of metastasis as cancer establishing another site away from where it started.
The cancer keeps the identity of its original cancer.
For example, cholangiocarcinoma that has spread to the lung is still cholangiocarcinoma.
New location does not mean new cancer type.
Ask: Where has my cholangiocarcinoma spread, how many metastatic sites are there, and does the pattern create any local treatment opportunity?
Distant metastasis
Cancer that has established disease in an organ, tissue or lymph node away from where it began.
See why all distant spread is not the same
Distant metastasis is not one single pattern.
One small metastatic site is different from widespread disease across several organs.
That difference can matter when local treatments such as surgery, radiation, ablation or interventional radiology are considered.
Ask: How many distant metastatic sites do I have, where are they, and can any of them be treated directly?
Oligometastatic disease
Metastatic cancer where only a limited number of areas of spread can be identified.
See why the number of metastases can matter
Think of oligometastatic disease as metastatic disease with only a limited number of visible sites.
In selected patients, treatment may combine whole-body therapy with local treatment directed at individual metastatic sites.
Limited metastatic sites identified → systemic treatment considered → local treatment options reviewed → combined strategy considered where appropriate.
Ask: Is the number and location of my metastatic sites limited enough for surgery, radiation, ablation or another local treatment to be considered?
Peritoneal disease / Peritoneal metastases
Cancer deposits involving the thin lining inside the abdomen and around many abdominal organs.
See how cancer reaches the peritoneum
Think of the peritoneum as the smooth living lining inside the abdomen.
It lines the abdominal cavity and covers the outer surfaces of many abdominal organs.
A small amount of fluid normally sits between these surfaces so organs can move smoothly.
Primary tumour → cancer cells escape → enter the abdominal cavity → move within peritoneal fluid → attach to the lining → survive and multiply → metastatic deposits form.
A report may use terms such as:
peritoneal disease,
peritoneal metastases,
peritoneal deposits,
peritoneal spread,
or peritoneal carcinomatosis.
These terms describe cancer involving the peritoneal lining.
Peritoneal disease can interfere with normal fluid movement and drainage in the abdomen.
This is one reason it can be associated with ascites, which means fluid collecting in the abdomen.
Important: Peritoneal disease and ascites are related concepts, but they are not the same thing.
Peritoneal disease also does not by itself tell you how extensive the cancer is.
A small number of deposits and widespread peritoneal involvement are different clinical pictures.
Ask: Where is the peritoneal disease, how extensive is it, is it causing ascites or another problem, and does the pattern create any treatment or specialist procedural option?
Patient-led question: What exactly is on my cancer map, which finding is driving the stage, and what treatment opportunity does that pattern still leave open?
SCANS & IMAGING
See what is there and what has changed
Scans help map where the cancer is, what structures it involves, whether it has spread, and how it changes over time. The important question is not simply what the scan is called, but what it was intended to answer.
Think of each scan as a different camera looking at the same problem.
CT, MRI, MRCP, PET and ultrasound do not all show the same information in the same way.
One may be better at mapping anatomy. Another may show the bile ducts more clearly. Another may help identify areas of unusual metabolic activity.
The useful question is: “Why was this scan chosen, what did it show, and what does that change?”
- Know why the scan was ordered.
- Understand what that scan can show well.
- Identify the important findings.
- Compare those findings with earlier imaging.
- Ask what changed and what that changes about treatment.
- A scan is a picture, not the whole diagnosis.
- Different scans answer different questions.
- “Lesion” or “mass” does not automatically mean cancer.
- Comparison with previous scans is often more useful than one scan viewed alone.
- The important result is not only what the scan shows, but what that finding changes about the next decision.
THE SCANS
Different cameras answer different questions
CT scan
A scan that uses X-rays to create detailed cross-sectional pictures of the inside of the body.
See what a CT is showing
Think of CT as taking the body and viewing it in thin internal slices.
Those slices can be reconstructed so the radiologist can examine:
tumour size,
tumour location,
blood vessels,
nearby organs,
lymph nodes,
and possible metastatic sites.
X-ray images collected → computer reconstructs body slices → radiologist maps abnormal areas → findings compared → treatment implications assessed.
Ask: What was this CT intended to answer, and what did it show that changes my treatment plan?
MRI scan
A scan that uses a strong magnetic field and radio waves to create detailed images of organs and soft tissue.
See where MRI can add detail
Think of MRI as a camera especially good at separating different types of soft tissue.
In cholangiocarcinoma, this can help define:
liver lesions,
bile duct involvement,
blood vessel relationships,
and the extent of disease
around the primary tumour.
Ask: What did the MRI clarify that was not clear on my other imaging?
MRCP
A specialised MRI technique used to create detailed pictures of the bile ducts and pancreatic duct.
See why MRCP is useful in bile duct cancer
Think of MRCP as creating a map of the bile duct plumbing.
Unlike ERCP, MRCP creates images without placing an endoscope into the bile ducts.
MRI performed → fluid-filled ducts highlighted → narrowing or obstruction mapped → extent along duct system assessed → drainage or treatment planning informed.
MRCP = imaging.
ERCP can also be used
to intervene in the bile ducts.
Ask: Where is the narrowing or blockage, and how far does it extend along the bile duct system?
PET scan / PET-CT
A scan that uses a small amount of radioactive tracer to show areas taking up more tracer than surrounding tissue.
See what PET is actually showing
PET is not simply a camera looking for tumour shape.
It is looking at where the tracer accumulates.
Many PET scans use a tracer related to glucose metabolism.
Important: Increased uptake does not automatically mean cancer. Inflammation, infection and some normal tissues can also take up tracer.
Not every cholangiocarcinoma shows strongly on PET, so PET findings are interpreted with CT, MRI and the wider clinical picture.
Ask: What areas showed abnormal uptake, and do those findings change my stage or treatment options?
Ultrasound
Imaging that uses sound waves to create pictures of structures inside the body.
See what ultrasound can show
Think of ultrasound as using echoes to build an image.
It can help assess:
bile duct dilation,
gallbladder changes,
liver abnormalities,
blood flow in some settings,
and fluid such as ascites.
Ultrasound can also be used to guide some procedures, including drainage and biopsy.
Ask: What abnormality was the ultrasound trying to confirm, and does it require another scan or procedure?
Contrast
A substance used during some scans to make blood vessels, organs and abnormal tissue easier to distinguish.
See what contrast adds to the picture
Think of contrast as temporarily increasing the difference between structures in the image.
Some tissues take up contrast quickly. Others take it up slowly or appear differently at different scan phases.
Contrast does not create the abnormality.
It helps make differences
easier to see.
Ask: Was contrast used, and did the contrast pattern help clarify what the abnormal area is?
WORDS IN THE REPORT
What did the radiologist actually see?
Lesion
An area of tissue that looks different from the surrounding tissue on a scan or other test.
See why lesion is a description, not a diagnosis
Think of “lesion” as the radiologist saying: “There is an area here that looks different.”
What that area represents depends on:
its appearance,
location,
size,
contrast behaviour,
change over time,
and sometimes pathology.
Ask: What does this lesion most likely represent, and what evidence supports that interpretation?
Mass
An abnormal area or lump of tissue seen on imaging or examination.
See what the word mass tells you
Mass describes shape or presence, not necessarily cause.
The radiologist may use other features to judge whether a mass looks suspicious for cancer.
Mass = something is there.
Diagnosis = what that something is.
Ask: Is this mass believed to be cancer, and what makes the team confident about that interpretation?
Enhancement
A change in how tissue appears after contrast has been given.
See what enhancement means
Think of enhancement as the tissue becoming more visible after contrast arrives.
Different tissues receive and retain contrast in different ways.
Enhancement is a clue.
It is not by itself
a cancer diagnosis.
Ask: What does the enhancement pattern suggest about this area, and is further investigation needed?
Uptake
The amount of tracer that collects in an area during imaging such as PET.
See what uptake does and does not mean
Uptake means tracer collected there.
It does not automatically tell you why it collected there.
Important: High uptake is not the same thing as confirmed cancer.
Ask: Is this uptake believed to represent cancer, inflammation, infection or something else, and why?
Measurable disease
Cancer that can be measured clearly enough on imaging to track changes in size over time.
See why measurable disease matters
Think of measurable disease as giving the team a repeatable ruler.
Selected lesions can be measured on one scan and then compared with later scans.
Baseline measurement → treatment begins → repeat scan → measurements compared → response or progression assessed.
Ask: Which areas are being measured to judge my treatment response, and how have those measurements changed?
READING THE RESULT
Who interprets the images, and what does the report mean?
Radiologist
A specialist doctor who interprets medical images such as CT, MRI, ultrasound and PET scans.
See the radiologist's job
Think of the radiologist as the doctor reading the map.
They look for:
abnormal areas,
changes in size,
relationships to nearby structures,
new disease,
and differences from previous imaging.
The radiology report is then combined with pathology, blood tests, clinical examination and specialist assessment.
Ask: Has my imaging been reviewed in the context of my cholangiocarcinoma and the treatment decision being considered?
Radiology report
The written interpretation of a scan prepared by the radiologist.
See how to read the report
Think of the radiology report as the written version of the scan map.
Reports commonly contain:
the scan technique,
comparison with earlier imaging,
detailed findings,
and an impression or conclusion.
The comparison matters.
A lesion seen today may mean something different if it was present and unchanged six months ago than if it is completely new.
Scan performed → current findings described → previous imaging compared → changes identified → impression written → treatment team interprets significance.
Findings
= what the radiologist sees.
Impression
= what the radiologist thinks
those findings mean.
Ask: Compared with my previous scan, what is new, what has changed, what is unchanged, and what does that change about my treatment?
Patient-led question: What was this scan trying to answer, what changed compared with my previous imaging, and what does that change about my treatment options?
PATHOLOGY & BIOPSY
What does the tissue tell us?
Tissue can confirm what the cancer is, describe its features and provide material for biomarker and molecular testing. The goal is not simply to obtain a sample, but to obtain enough useful tissue for the decisions that may follow.
Think of the tissue sample as physical evidence from the cancer.
A scan shows what an abnormal area looks like. Pathology examines the actual cells or tissue from that area.
That sample may need to do more than one job: confirm the diagnosis, identify the cancer type, support additional pathology tests and leave enough material for molecular profiling.
The important question is: “Do we have enough of the right tissue to answer the questions that matter now and later?”
- Obtain the safest useful sample.
- Confirm what the cells or tissue are.
- Understand what type of sample was collected.
- Preserve enough suitable tissue for additional testing where possible.
- If the result is negative, inconclusive or insufficient, understand what should happen next.
- Biopsy collects the evidence. Pathology examines it.
- Not every biopsy collects the same amount of tissue.
- Tissue may be needed for diagnosis and molecular testing.
- A negative sample does not always prove cancer is absent.
- Know where your stored tumour tissue is and how much remains.
GETTING THE EVIDENCE
How is the sample obtained?
Biopsy
A procedure that removes cells or tissue from an abnormal area so they can be examined.
See what the biopsy needs to achieve
Think of biopsy as collecting evidence directly from the abnormal area.
The sample can then be used to examine the cells and determine what disease is present.
But the sample may also need to support additional testing later.
Abnormal area identified → sample collected → pathology examines tissue → diagnosis clarified → remaining tissue considered for further testing.
The goal is not only:
“Get a biopsy.”
It is:
“Get enough useful tissue
for the decisions that may follow.”
Ask: Is there enough suitable tissue to confirm the diagnosis and complete the testing I may need?
Core biopsy
A biopsy that uses a hollow needle to remove a small cylinder of tissue.
See why a core sample can matter
Think of a core biopsy as removing a tiny column of the abnormal tissue.
This lets the pathologist see:
the cancer cells,
how they are arranged,
and some of the tissue
around them.
Having more tissue can also create more material for additional testing.
Ask: Will this biopsy provide enough tissue for molecular profiling as well as diagnosis?
Fine needle aspiration (FNA)
A thin needle is placed into an abnormal area to remove cells or fluid for examination.
See what an FNA provides
Think of FNA as collecting cells rather than removing a larger piece of tissue.
Those cells can be examined for cancer.
Because the sample may contain fewer cells and less tissue structure, it may not always support every additional test.
Ask: If molecular testing may be needed, will this FNA provide enough material?
Bile duct brushing
A small brush is passed across an abnormal or narrowed area of the bile duct to collect cells.
See what a brushing collects
Think of the brush as collecting cells from the surface of the narrowed bile duct.
Those cells are then examined using cytology.
Important: A brushing can sometimes be negative or inconclusive even when clinical suspicion remains, because only a limited number of abnormal cells may be collected.
Ask: Did the brushing provide a definite diagnosis, or is further tissue sampling needed?
READING THE SAMPLE
What happens after the tissue reaches pathology?
Pathology
The examination of cells and tissue to identify what disease is present and what the cells look like.
See what pathology adds beyond the scan
Imaging shows the abnormal area. Pathology examines the actual cells or tissue.
Sample collected → tissue prepared → cells examined → cancer type assessed → additional tests requested where needed → pathology report issued.
Scan = what it looks like.
Pathology = what the sampled tissue is.
Ask: What exactly did the pathology confirm, and what remains uncertain?
Pathologist
A specialist doctor who examines cells and tissue to diagnose disease and describe its features.
See the pathologist's role
Think of the pathologist as the doctor reading the biological evidence inside the tissue.
They may use:
tissue appearance,
cell shape,
tissue organisation,
staining patterns,
and other laboratory tests.
Difficult cases may require specialist review or comparison with other clinical information.
Ask: Is the diagnosis clear, or would specialist pathology review add useful certainty?
Histology
What the tissue and cancer cells look like under a microscope.
See what histology is describing
Think of histology as looking at the architecture of the tissue.
The pathologist looks at:
what the cells look like,
how they are arranged,
and how the tissue pattern
compares with known cancer types.
Ask: What histology was found, and is it consistent with cholangiocarcinoma?
Cytology
The examination of individual cells or small groups of cells under a microscope.
See the difference between cytology and histology
Cytology looks mainly at cells. Histology looks at cells within tissue structure.
Cytology
= individual cells or small cell groups.
Histology
= cells plus tissue architecture.
Ask: Was my diagnosis based on cytology, histology or both, and is the result considered definitive?
Pathology report
The written report describing what the pathologist found in the cells or tissue examined.
See what may be inside the report
Think of the pathology report as the written record of what the tissue showed.
Depending on the specimen, it may include:
diagnosis,
cancer type,
differentiation,
tumour grade,
lymph node findings,
surgical margins,
and additional test results.
Ask: Can I have a complete copy of my pathology report?
PROTECTING THE TISSUE
The sample may still matter after diagnosis
Specimen
The cells, tissue, fluid or organ material collected and sent for laboratory examination.
See what specimen means
Specimen is the laboratory word for the material that was collected.
It might be:
biopsy tissue,
cells,
fluid,
lymph nodes,
or tissue removed during surgery.
Ask: What specimen do I have, and is it suitable for further testing if needed?
Tissue block
Preserved tissue stored by the pathology laboratory so thin sections can be cut for further testing.
See why stored tissue matters
Think of the tissue block as a stored biological record of the tumour.
Small sections can be cut from the block when another test is requested.
Each test may use some of the available material.
Tissue is not unlimited.
Know what is stored
and what remains.
Ask: Where is my tumour tissue stored, and how much remains available for further testing?
Insufficient tissue / Inadequate sample
The sample does not contain enough suitable cancer cells or tissue to complete the requested test.
See what should happen next
Think of this as a sample problem, not automatically a testing problem.
The next question is whether:
another tissue block exists,
another previous specimen is available,
the existing sample can be retested differently,
or another safe sample can be obtained.
Test requested → tissue assessed → sample inadequate → other stored material checked → alternative sampling considered → testing pathway reassessed.
Ask: Is there another stored sample available, or can another safe way of obtaining enough tissue be assessed?
UNDERSTANDING THE RESULT
What does the result actually prove?
Positive result
The test found the specific abnormality it was looking for.
See why positive depends on the test
Positive always needs a second question: positive for what?
A result might be positive for:
malignant cells,
a protein marker,
a mutation,
or another tested feature.
Ask: What exactly was positive, and what does that result change about my diagnosis or treatment?
Negative result
The test did not find the specific abnormality it was looking for in the sample tested.
See why negative does not always mean absent
A test can only examine the material that was actually collected.
If the abnormal area is difficult to sample, a biopsy can sometimes collect nearby tissue without capturing enough cancer cells.
Negative sample ≠ always proven absence of cancer.
Ask: Does this negative result confidently exclude cancer, or could the sample have missed it?
Inconclusive / Indeterminate
The sample does not provide enough certainty to say clearly what the abnormality is.
See what an inconclusive result means
Think of inconclusive as “not enough certainty yet.”
The next step might involve:
additional staining,
specialist review,
another specimen,
or another biopsy.
Ask: What is preventing a definite answer, and what is the next step to resolve that uncertainty?
Pathology review / Second pathology opinion
Another pathologist reviews the original tissue, slides or pathology findings to confirm or clarify the diagnosis.
See when another review can help
Think of a second pathology review as another specialist examining the same biological evidence.
It may be especially useful when:
the diagnosis is uncertain,
the sample is unusual,
another primary cancer is possible,
or treatment depends heavily
on the exact diagnosis.
Ask: Would specialist pathology review add useful certainty before the next major treatment decision?
Patient-led question: What did my tissue actually prove, what remains uncertain, and do we have enough suitable tissue for the testing that may affect my next treatment decision?
PATHOLOGY, IHC & DIAGNOSTIC MARKERS
What did the pathologist test?
IHC uses visible protein stains to help identify what the cancer cells are, whether important cellular systems are working, and whether particular treatment questions need further investigation.
Think of IHC as putting visible labels on the cancer cells.
Each stain is designed to show a particular protein.
One protein can provide a clue. A group of results together can create a much stronger pattern.
The important question is: “What was tested, what pattern was found, and what does that pattern change?”
- Understand what IHC is measuring.
- Identify which proteins were present or lost.
- Read related markers as a pattern, not as isolated results.
- Separate diagnostic markers from treatment-relevant markers.
- Ask whether any important test is missing or needs confirmation by another method.
- IHC shows proteins in or on cells.
- One stain is a clue. The pattern is more informative.
- MMR uses four important proteins: MLH1, PMS2, MSH2 and MSH6.
- A diagnostic marker is not automatically a treatment marker.
- A positive or negative marker must always be interpreted in the context of the whole pathology result.
START HERE
Understand the pathology test
IHC uses antibodies and coloured stains to show whether particular proteins are present in the tumour cells and where those proteins appear.
IHC / Immunohistochemistry
A laboratory method that uses antibodies and coloured stains to show particular proteins in or on tumour cells.
See how IHC works
Think of IHC as attaching visible labels to proteins inside the tissue.
Different stains answer different questions.
One stain = one clue.
Several related stains = a pattern.
Ask: What IHC tests were performed on my tumour, what did each one show, and is anything important still missing?
Pathology Checklist
A way to check what the pathology report has established, what has been tested, and what is still not shown or unclear.
View the pathology checklist
Check whether the report records whether the tumour is:
- dMMR — mismatch repair deficient
- pMMR — mismatch repair proficient
The four MMR proteins should also be recorded:
- MLH1
- PMS2
- MSH2
- MSH6
Check whether the report records:
- MSI-H — microsatellite instability high
- MSS — microsatellite stable
- PD-L1
- HER2
- CK7
- CK19
Important: Not every test is required for every patient. The purpose of this checklist is to make clear what was tested, what result was found, what is not shown, and why any test was not considered necessary.
Ask: Which pathology results have been established in my case, which are not shown, and is there anything important that still needs to be checked?
DNA MISMATCH REPAIR
Two pairs. One repair system.
MSH2 and MSH6 help recognise DNA copying errors. MLH1 and PMS2 help organise the repair process that follows.
The MMR Protein System
A DNA quality-control system that helps recognise and repair copying mistakes.
See how the four proteins work together
Think of mismatch repair as a DNA checking and repair team.
MLH1 + PMS2 help coordinate the repair process.
DNA copied → mismatch recognised → repair team recruited → incorrect section removed → DNA rebuilt correctly.
If part of the system is missing, mistakes can remain and accumulate.
Ask: Were all four MMR proteins tested, and were any of them lost?
MSH2
An MMR protein that partners with MSH6 to help recognise DNA copying errors.
See MSH2's job
Think of MSH2 as one half of the fault-finding pair.
The full MMR pattern matters. MSH2 should not be interpreted in isolation.
Ask: Was MSH2 retained or lost, and what happened to MSH6?
MSH6
An MMR protein that partners with MSH2 to help recognise DNA copying errors.
See MSH6's job
Think of MSH6 as MSH2's detecting partner.
Ask: Was MSH6 retained or lost, and what does the full four-protein MMR pattern show?
MLH1
An MMR protein that partners with PMS2 to help coordinate repair after a mismatch has been recognised.
See MLH1's job
Think of MLH1 as one half of the repair-coordination pair.
Ask: Was MLH1 retained or lost, and was PMS2 lost with it?
PMS2
An MMR protein that partners with MLH1 in the repair process.
See PMS2's job
Think of PMS2 as MLH1's repair partner.
Ask: Was PMS2 retained or lost, and what happened to MLH1?
TREATMENT-RELEVANT MARKERS
Protein signals that can affect treatment questions
Some IHC findings can help identify whether a treatment-related pathway or target needs further consideration.
PD-L1
A normal immune-regulating protein that can send a stand-down signal to a T cell through PD-1.
See how the PD-1 / PD-L1 signal works
Start with the T cell.
The T cell's job is to recognise and attack dangerous cells.
PD-L1 = one of the signals that can engage that brake.
During normal inflammation, cells can increase PD-L1 to help prevent excessive immune damage.
Immune activity increases → PD-L1 can rise → PD-L1 binds PD-1 → T-cell activity is reduced.
Cancer can exploit this normal regulatory system.
In some tumour cells, the controls driving PD-L1 expression can also become dysregulated, allowing the signal to remain stronger or more persistent.
Cancer did not invent
the PD-1 / PD-L1 system.
It can survive by exploiting
a normal immune-control pathway.
Drugs such as pembrolizumab and nivolumab block PD-1. Durvalumab blocks PD-L1.
Important: PD-L1 expression is not a universal requirement for immunotherapy use in cholangiocarcinoma. Its relevance depends on the treatment, biomarker context and clinical setting.
Ask: Was PD-L1 tested, what was the exact result, and does that result change any treatment option for me?
HER2 IHC
An IHC test that shows how much HER2 protein is present on tumour cells.
See what HER2 IHC is measuring
Think of HER2 as a growth-signal receiver on the outside of the cell.
Too many receivers → growth signals can become amplified.
HER2 IHC asks how much HER2 protein is visible on the tumour cells.
Reports may use scores such as 0, 1+, 2+ or 3+.
Important: HER2 protein expression, HER2 gene amplification and HER2 gene mutation are different findings.
Ask: What exact HER2 result do I have, and does it require another HER2 test or create a treatment option?
DIAGNOSTIC IHC
How does pathology help identify cholangiocarcinoma?
Diagnostic IHC combines multiple protein markers with the appearance of the tissue and the clinical picture to help determine what type of cancer is present.
How IHC Helps Identify Cholangiocarcinoma
Cholangiocarcinoma is usually identified from a combination of tissue appearance, IHC pattern and the wider clinical picture.
See how the pattern is built
Think of each stain as one part of the cancer cell's identity.
The pathologist combines:
what the tumour looks like,
which proteins it expresses,
which proteins it does not express,
where the tumour is located,
and what other primary cancers
need to be excluded.
Tissue appearance assessed → IHC panel selected → marker pattern interpreted → competing diagnoses considered → overall diagnosis formed.
One marker is a clue.
The pattern builds the diagnosis.
Ask: What pathology and IHC pattern supports cholangiocarcinoma in my case, and what was used to exclude another possible primary cancer?
CK7 / Cytokeratin 7
A structural protein commonly found in many epithelial cells, including bile-duct cells.
See what CK7 tells the pathologist
Think of CK7 as part of the internal framework of the cell.
Cholangiocytes commonly contain CK7, so many cholangiocarcinomas show CK7 staining.
Important: Other epithelial cancers can also be CK7-positive. CK7 cannot prove cholangiocarcinoma by itself.
Ask: Was my tumour CK7-positive, and what other stains were interpreted with CK7 to establish the diagnosis?
CK19 / Cytokeratin 19
Another structural protein commonly found in bile-duct epithelial cells.
See what CK19 tells the pathologist
Think of CK19 as another internal support protein inside the cell.
Cholangiocytes commonly contain CK19, and many cholangiocarcinomas retain this protein.
Important: CK19 is not unique to cholangiocarcinoma. It supports the overall pattern rather than proving the diagnosis by itself.
Ask: Was my tumour CK19-positive, and how did that result contribute to the overall diagnosis?
Patient-led question: What proteins were tested, what pattern did they create, what does that pattern establish, and does anything important still need to be tested?
BLOOD TESTS & TUMOUR MARKERS
What is your blood telling you?
Blood tests provide signals about liver cells, bile flow, liver function, fluid balance and substances associated with cancer. One number rarely gives the answer. The pattern and the direction over time matter more.
Think of blood tests as messages coming back from different parts of the system.
Some signals come from stressed liver Cell Cities. Some reflect pressure in the bile-flow system. Some tell you about jobs the liver performs. Others are substances that may rise with cancer or other conditions.
The important question is not simply: “Is this high or low?”
It is: “What could be causing this, what pattern does it form, and which direction is it moving?”
- Identify what system the test is reading.
- Look at the other related blood results.
- Consider what else could change that result.
- Compare it with earlier results.
- Ask what the pattern requires next.
- One blood result is one signal.
- A pattern is more useful than one isolated number.
- A trend is more useful than one isolated day.
- A tumour marker is not a direct cancer counter.
- Always ask what else could be causing the result.
LIVER CELLS & BILE FLOW
Which part of the liver-bile system is under stress?
Liver function tests (LFTs)
A group of blood tests giving different clues about liver cells, bile flow and some of the jobs the liver performs.
See how the pattern fits together
Picture the liver as millions of working Cell Cities connected to a bile drainage system.
Liver Cell Cities → bile canaliculi → cholangiocyte-lined bile ducts → larger ducts → bile flows onward.
ALT and AST
can signal cell injury.
ALP and GGT
can signal biliary or bile-flow stress.
Bilirubin
can signal a problem processing
or draining bile.
Albumin and INR
can provide clues about
some of the liver's production functions.
Ask: Which liver blood tests are abnormal, what pattern do they form, and does that pattern point toward bile-flow obstruction, liver-cell injury, impaired liver function or something else?
Bilirubin
A yellow waste substance processed by the liver and normally removed from the body through bile.
See how bilirubin normally leaves the body
Think of bilirubin as waste that needs an open route out.
Bilirubin reaches liver → liver processes it → bilirubin enters bile → bile moves through ducts → bilirubin reaches intestine → leaves the body.
If bile flow is blocked, bilirubin can build up in the bloodstream.
This can produce jaundice, including yellowing of the skin and eyes.
Important: High bilirubin does not by itself tell you where the problem is or what is causing it.
Ask: Is my bilirubin rising because bile is blocked, because the liver is struggling to process it, or because of another cause?
ALP / Alkaline phosphatase
An enzyme found in several tissues, including the liver and biliary system.
See why ALP needs context
In cholangiocarcinoma, raised ALP often makes clinicians look closely at the biliary system.
ALP becomes more useful when read with GGT, bilirubin, imaging and the rest of the liver tests.
Ask: Does my ALP pattern suggest a bile-flow problem, and how does it compare with my GGT, bilirubin and imaging?
GGT
An enzyme associated mainly with the liver and biliary system that can rise when these tissues are under stress.
See what GGT adds to the picture
GGT is usually more useful as part of a pattern than as a stand-alone result.
ALP abnormal → GGT checked → bilirubin and other liver tests reviewed → imaging considered → likely source interpreted.
Ask: What does my GGT add to the picture created by my ALP, bilirubin and other liver tests?
ALT
An enzyme found mainly inside liver cells that can enter the bloodstream when those cells are injured.
See how ALT reaches the bloodstream
Picture ALT as something normally kept inside the liver Cell City.
Healthy liver cell
→ ALT remains mainly inside.
Cell injured
→ membrane disrupted
→ ALT leaks into blood
→ blood level rises.
ALT can rise with inflammation, medicines, infection, impaired blood supply, bile-flow problems and other liver injury.
Ask: What is most likely injuring my liver cells, and is the ALT trend improving or worsening?
AST
An enzyme found in liver cells and several other tissues that can enter the blood when cells are injured.
See why AST is not liver-specific
AST is also present in muscle and other tissues.
Raised AST does not automatically mean the liver is the source.
Ask: Does my AST pattern, together with ALT and the other blood tests, suggest liver injury or another source?
LIVER FUNCTION & FLUID BALANCE
Is the liver still performing its production jobs?
Albumin
A protein made mainly by the liver that circulates in blood and helps keep fluid inside blood vessels.
See how albumin affects fluid balance
Think of albumin as part of the pull that helps keep water inside the bloodstream.
Normal albumin
→ stronger pull inside circulation
→ fluid balance maintained.
Low albumin
→ less pull
→ fluid can move out more easily
→ swelling or fluid accumulation may develop.
This pulling force is sometimes called oncotic pressure.
Low albumin can contribute to oedema and to ascites .
Important: Low albumin is only one possible contributor to fluid accumulation. Ascites can also be driven by portal or venous pressure, peritoneal disease, lymphatic problems, liver dysfunction or several mechanisms together.
Albumin can fall because of reduced liver production, inflammation, poor nutritional intake, protein loss, infection, fluid shifts or other illness.
Treat the cause, not only the number.
Ask: Why is my albumin low, can anything contributing to it be corrected, and is it contributing to ascites, oedema or another problem?
INR
A blood test showing how long blood takes to clot compared with a standard.
See what can change INR
INR is not a cancer marker.
A higher INR generally means blood is taking longer to clot.
Liver function, blood-thinning medicines, vitamin K status and other conditions can all affect INR.
Ask: Is my INR abnormal, and is the cause related to liver function, medication, vitamin K or something else?
TUMOUR MARKERS
Signals associated with cancer, not direct cancer counters
CA 19-9
A substance measured in blood that can be elevated in some people with cholangiocarcinoma.
See why CA 19-9 needs context
Think of CA 19-9 as a signal, not a verdict.
CA 19-9 can rise with:
cancer,
bile obstruction,
biliary inflammation,
and infection such as cholangitis.
CA 19-9 result + bile drainage + bilirubin + infection status + scans + treatment timing → useful interpretation.
Some people also do not naturally produce meaningful CA 19-9 levels because of their Lewis antigen biology.
Important: A low CA 19-9 does not by itself exclude cancer, and a high CA 19-9 does not by itself prove progression.
Ask: Is my CA 19-9 being interpreted alongside bile drainage, bilirubin, infection status, scans and my previous results?
CEA
A substance measured in blood that can be elevated in several cancers, including some cholangiocarcinomas.
See when CEA may be useful
CEA is most useful when it has shown a meaningful relationship with the disease in that particular patient.
One CEA result
= one clue.
A repeated trend
compared with scans
can be more informative.
Ask: Is CEA useful in my case, and what does its trend show when compared with my scans and other results?
Tumour marker
A measurable substance that may provide information about cancer or how it is changing.
See how tumour markers should be used
A tumour marker can rise, fall or stay stable for reasons not explained by cancer alone.
Marker measured → possible non-cancer causes considered → trend reviewed → scans and symptoms compared → clinical meaning interpreted.
Tumour marker = one part of the evidence.
Ask: Which tumour markers are actually useful in my case, and what other evidence is being used to interpret them?
READING RESULTS OVER TIME
Direction can matter more than one number
Trend
The pattern created when the same result is measured repeatedly over time.
See why direction matters
One result
= one photograph.
A series of results
= a short film showing direction.
A result can remain outside the reference range while still improving.
Another can remain inside the reference range while moving consistently in an unwanted direction.
Ask where the number is going, not only where it is today.
Ask: What does the trend show, rather than just today's number?
Reference range
The range a laboratory uses to show where expected values commonly fall for that test.
See why the range is not a pass-or-fail line
Think of the reference range as a comparison tool, not a verdict.
Your result needs to be interpreted with:
previous results,
symptoms,
treatment,
bile flow,
liver function,
and the reason the test was ordered.
Different laboratories can also use slightly different ranges.
Ask: Is this result important because it is outside the range, because it has changed from my usual level, or because of the pattern it forms with my other results?
Patient-led question: What system is this blood result reading, what else could be causing it, what pattern does it form with my other results, and what does the trend mean for my next decision?
SYMPTOMS & COMPLICATIONS
What is the cancer causing in your body?
Symptoms tell you what you are experiencing. Complications help explain what may be causing those symptoms. Understanding the cause is what helps identify what can be relieved, reversed or treated next.
Think of a symptom as an alarm.
The alarm tells you something has changed. It does not always tell you why.
The next job is to identify what is creating the problem.
The useful question is: “What is causing this symptom, is the cause reversible, and what can be done now?”
- Name the symptom or complication clearly.
- Identify the likely cause.
- Ask whether the cause is reversible or treatable.
- Relieve the symptom while the cause is addressed.
- Reassess if the symptom changes or returns.
- A symptom is a signal, not the diagnosis.
- The same symptom can have several causes.
- Some complications are reversible.
- Treating the symptom and treating the cause are not always the same thing.
- Ask why the problem is happening before assuming it is simply “the cancer”.
FLUID & PRESSURE
What is causing fluid to collect?
Ascites
An abnormal build-up of fluid inside the abdominal cavity.
See how ascites develops
Think of the abdomen as a space lined by a thin living membrane called the peritoneum.
Normally, only a very small amount of fluid sits between these surfaces.
This fluid acts as lubrication so abdominal organs can move smoothly.
Normal small amount of fluid → pressure rises, fluid movement changes or drainage is reduced → more fluid enters the space than can be removed → fluid accumulates → abdomen expands → pressure can affect nearby organs.
In cholangiocarcinoma, several mechanisms can contribute.
Peritoneal disease
can irritate the lining
and interfere with lymphatic drainage.
Portal or venous pressure
can push more fluid
out of blood vessels.
Low albumin
can reduce the force
helping keep fluid
inside the circulation.
Liver dysfunction
can also alter fluid balance.
Important: Ascites does not automatically mean peritoneal metastases. The cause needs to be identified.
Ascites can cause:
abdominal swelling,
tightness,
discomfort,
early fullness,
reduced appetite,
and sometimes breathlessness.
Ultrasound or CT can show the fluid.
A procedure called paracentesis can remove fluid and provide a sample for testing.
The fluid may be tested for:
cancer cells,
infection,
protein,
and other features
that help identify the cause.
Malignant ascites: Cancer-associated ascites is not automatically called malignant ascites. That term is generally used when malignant cells are identified in the fluid.
Ask: What is causing my ascites? Is it related to peritoneal disease, portal or venous pressure, low albumin, impaired lymphatic drainage or something else? Should the fluid be sampled, and what can be done now to reduce it?
Paracentesis
A procedure used to remove ascites from the abdominal cavity through a needle or small drainage catheter.
See what paracentesis does
Think of paracentesis as creating a controlled outlet for fluid that has collected in the abdomen.
Ascites accumulates → abdomen becomes tight or uncomfortable → safe fluid pocket identified → needle or catheter inserted → fluid drained → abdominal pressure falls.
The needle or catheter enters the peritoneal cavity where the fluid is sitting.
It does not enter the stomach or bowel.
Ultrasound is commonly used to find a safe location for drainage.
Paracentesis may be performed for two main reasons:
symptom relief,
and diagnostic testing.
Removing fluid can reduce:
abdominal pressure,
tightness,
discomfort,
early fullness,
and sometimes breathlessness.
Fluid may also be sent to the laboratory to look for:
malignant cells,
infection,
protein,
and other features.
Important: Paracentesis treats the fluid build-up. It does not by itself treat the underlying reason the ascites formed.
If ascites repeatedly returns, drainage may need to be repeated.
In selected patients, a longer-term drainage catheter may also be considered.
Ask: Why is paracentesis being recommended for me? Is it mainly to relieve pressure, to test the fluid, or both? What will the fluid be tested for, and what is the plan if the ascites returns?
Patient-led question: What is causing this problem, is the cause reversible, what can be relieved now, and what needs to be treated to stop it happening again?
FINANCIAL, TRAVEL & FAMILY SUPPORT
Reduce the practical load of cancer
Cancer can affect income, travel, accommodation, work, household life and the people caring for you. Practical support can remove part of that load so more energy stays available for treatment and family.
Think of cancer as creating a second workload around the medical one.
Appointments, travel, lost income, accommodation, forms, bills, household jobs and caring responsibilities can all accumulate.
You do not need to carry every part of that load yourself.
The useful question is: “What pressure is cancer creating, and who can help remove it?”
- Identify the practical pressure affecting you or your family.
- Find the organisation responsible for that type of support.
- Check eligibility before assuming you do not qualify.
- Ask what forms, evidence or referrals are required.
- Put support in place before the problem becomes a crisis.
- Cancer can increase costs while reducing income.
- Travel and accommodation support may need to be organised before treatment.
- Carers may qualify for their own payments and services.
- Your superannuation may contain insurance you have forgotten about.
- Ask for practical help early, not only when the family is exhausted.
MONEY & MEDICAL COSTS
What financial pressure can be reduced?
Financial assistance
Help that may reduce the financial pressure created by cancer, treatment or loss of income.
See where financial help may come from
Think of financial pressure as several smaller problems that may have different solutions.
Medical costs,
travel,
accommodation,
reduced income,
bills,
and caring responsibilities
may each have separate support pathways.
Financial pressure identified → type of cost separated → relevant support service found → eligibility checked → application made → pressure reduced where possible.
Financial assistance can come from:
government payments,
Medicare,
travel schemes,
charities,
hospital support,
or hardship programs.
Cancer Council: 13 11 20
Ask: Cancer is creating financial pressure for our family. Can you help me identify every financial, travel and practical support program I may qualify for?
Medicare Safety Net
A Medicare system that can increase rebates for eligible out-of-hospital services after yearly costs reach the relevant threshold.
See what to check
Once the relevant threshold is reached, Medicare may pay a higher benefit for eligible services for the rest of that calendar year.
Important: Couples and families should check whether they are registered as a Medicare Safety Net family, so eligible costs can be combined.
Medicare enquiries: 132 011
Ask: Have I reached or am I approaching a Medicare Safety Net threshold, and is my family correctly registered?
Superannuation & insurance
Insurance or financial options attached to your superannuation that may become relevant after a serious illness.
See what to check with your fund
Ask whether your account includes:
income protection,
total and permanent disability cover,
life insurance,
or other benefits.
In some circumstances, early access to superannuation may also be possible.
Ask your super fund: What insurance, income protection or early-access options are attached to my superannuation?
TRAVEL & ACCOMMODATION
What support exists if specialist care is away from home?
Patient travel assistance
Government assistance that may contribute to travel and accommodation costs when specialist treatment requires travel away from home.
See whether this may apply to you
Eligibility may depend on:
where you live,
how far you need to travel,
the treatment required,
and whether that service
is available closer to home.
Specialist treatment identified → travel requirement confirmed → state scheme checked → application completed → travel or accommodation subsidy assessed.
Ask your treatment centre: Do I qualify for my state or territory patient travel assistance scheme, and can you help me complete the application?
Accommodation support
Help with accommodation when treatment requires you or your family to stay away from home.
See where accommodation help may come from
Accommodation support may come from:
your state patient travel scheme,
Cancer Council,
your treatment hospital,
or local cancer charities.
Before booking: Check whether subsidised or supported accommodation is available, particularly for longer treatment periods.
Ask: I need to stay away from home for treatment. What subsidised accommodation is available for me and the person travelling with me?
CARERS & FAMILY
What support exists for the people carrying the load with you?
Carer Payment
An income-support payment for some people who provide constant care to someone with a severe medical condition or disability.
See whether this may apply
Eligibility depends on:
the level of care provided,
the circumstances of the person receiving care,
and relevant income
and assets rules.
Ask Services Australia: I am providing substantial care for someone with cancer. Could I qualify for Carer Payment, Carer Allowance or both?
Carer Allowance
A supplementary payment for some people who provide daily care and attention to someone with a medical condition or disability.
See why you should check both
Depending on circumstances, a carer may be eligible for one payment or potentially more than one form of carer support.
Ask: Which carer payments should I be assessed for based on the care I am providing?
Carer Gateway
A free Australian Government service supporting unpaid carers.
See what Carer Gateway may provide
Support can include:
counselling,
peer support,
planned respite,
emergency respite,
practical assistance,
and tailored support packages.
Carer Gateway: 1800 422 737
Ask: I am caring for someone with cancer. What practical support, respite or counselling can you provide me now?
Family & carer support
Support for the people carrying the practical and emotional load alongside the patient.
See why the family needs its own support
Partners, children, family members and unpaid carers may all carry:
emotional pressure,
transport,
appointments,
household responsibilities,
work disruption,
and financial pressure.
Supporting the caregiver supports the patient.
Ask: What support is available specifically for the person caring for me and for our family?
PRACTICAL, WORK & LEGAL SUPPORT
What can reduce the everyday workload around treatment?
Cancer Council support
A national entry point for practical, financial and emotional cancer support.
See what Cancer Council may help with
Cancer Council can help connect patients and families with:
financial assistance,
transport,
practical support,
emotional support,
legal and workplace assistance,
and local services.
Cancer Council: 13 11 20
Ask: Can you help me work through what practical and financial support is available to us right now?
Legal, workplace & financial help
Specialist assistance with problems cancer can create around work, money, insurance, business or legal matters.
See what help may be available
Cancer Council's Pro Bono Program may connect eligible patients with professional assistance in areas such as:
legal issues,
financial planning,
workplace matters,
and small business accounting.
Cancer Council: 13 11 20
Ask: Is there a legal, workplace or financial problem that I can get professional help with rather than trying to solve alone?
Help at home
Practical assistance with everyday tasks when cancer or treatment makes normal household life difficult.
See what practical help may include
Depending on where you live, support may include:
meals,
shopping,
cleaning,
transport,
nursing,
respite,
and other community services.
Your hospital social worker, Cancer Council or Carer Gateway may be able to identify services available locally.
Ask: Treatment is making it difficult for us to manage at home. What practical support services can be arranged locally?
Patient-led question: What practical pressure is cancer creating for us, who is responsible for helping with it, what are we eligible for, and what load can be removed now?

